Basic Information
Locus ID:
BniB03g031310.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 14640590 | 14659184 | + | BniB03g031310.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.47 | 224,446.02 Da | 55.62 | 57.52 | -0.88 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 145 | 1.8E-64 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1228 | 1367 | 1.4E-62 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 992 | 1135 | 1.7E-58 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 238 | 378 | 1.2E-55 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 1231 | 1367 | 6.15E-22 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 5 | 146 | 2.62E-15 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 998 | 1137 | 1.37E-17 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 242 | 379 | 3.01E-19 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 997 | 1135 | 8.1E-13 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 5 | 144 | 9.7E-13 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 246 | 374 | 5.7E-13 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 1235 | 1356 | 2.4E-15 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1743 | 1772 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1886 | 1930 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1545 | 1949 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1639 | 1658 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1796 | 1810 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1966 | 1999 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 497 | 538 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1460 | 1498 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 396 | 721 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1931 | 1947 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 705 | 719 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1709 | 1724 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1864 | 1879 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1446 | 1498 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1570 | 1584 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1692 | 1708 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1969 | 1992 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 581 | 601 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 473 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1659 | 1691 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 602 | 662 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1585 | 1638 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27100.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_013596291.1 | PREDICTED: uncharacterized protein LOC106304425 isoform X1 [Brassica oleracea var. oleracea] | 0 |
| TrEMBL | A0A8X7W2B1 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_014108 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology