Basic Information
Locus ID:
BniB03g029940.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 13903465 | 13904241 | + | BniB03g029940.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.72 | 12,684.62 Da | 53.06 | 101.67 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 7 | 90 | 1.03856E-39 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 5 | 112 | 2.1E-34 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 3 | 91 | 1.87E-24 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 96 | 4.1E-33 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 114 | 7.7E-40 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 7 | 75 | 11.83414 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G22050.1 | membrane-anchored ubiquitin-fold protein 6 precursor. | 0 |
| RefSeq | XP_009103265.1 | membrane-anchored ubiquitin-fold protein 6 [Brassica rapa] | 0 |
| Q8GWJ6 | Membrane-anchored ubiquitin-fold protein 6 OS=Arabidopsis thaliana OX=3702 GN=MUB6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8B238 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_014237 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology