Basic Information
Locus ID:
BniB03g029420.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 13529396 | 13531045 | - | BniB03g029420.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 35,876.42 Da | 30.52 | 92.28 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 17 | 307 | 4.2E-71 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 13 | 312 | 1.03E-94 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 12 | 103 | 1.5E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 105 | 315 | 6.9E-69 | - |
| SMART | SM00220 | serkin_6 | 17 | 307 | 5.4E-93 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 17 | 307 | 45.064152 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 144 | 156 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 23 | 46 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G20930.1 | cyclin-dependent kinase B2;2. Cyclin-dependent kinase, expressed in flowers and suspension cell culture, expression peaks during M phase in synchronized cultures. Required for proper organization of the shoot apical meristem and for hormone signaling. Expressed in the shoot apical meristem. Involved in regulation of the G2/M transition of the mitotic cell cycle. | 0 |
| RefSeq | XP_013595762.1 | PREDICTED: cyclin-dependent kinase B2-2 [Brassica oleracea var. oleracea] | 0 |
| Q8LG64 | Cyclin-dependent kinase B2-2 OS=Arabidopsis thaliana OX=3702 GN=CDKB2-2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A397YUQ6 | (field mustard) hypothetical protein OS=Brassica campestris OX=3711 GN=BRAA07T29277Z PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology