Basic Information
Locus ID:
BniB03g026990.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 12299404 | 12301029 | - | BniB03g026990.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 44,159.60 Da | 37.00 | 85.11 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 49 | 318 | 1.10151E-97 | - |
| Pfam | PF00069 | Protein kinase domain | 44 | 313 | 9.9E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 24 | 316 | 2.23E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 8 | 118 | 1.6E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 119 | 332 | 2.5E-57 | - |
| SMART | SM00220 | serkin_6 | 43 | 316 | 5.2E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 43 | 319 | 38.251564 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 49 | 71 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 167 | 179 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16670.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013710570.2 | cold-responsive protein kinase 1-like [Brassica napus] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3P5Y877 | (field mustard) hypothetical protein OS=Brassica campestris OX=3711 GN=BRAA09T41453Z PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology