Basic Information
Locus ID:
BniB03g026850.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
(E 0.0) protein kinase family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 12220458 | 12224707 | + | BniB03g026850.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 124,503.11 Da | 53.39 | 70.86 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 148 | 244 | 1.86944E-49 | - |
| CDD | cd13999 | STKc_MAP3K-like | 849 | 1106 | 1.57923E-108 | - |
| Pfam | PF00564 | PB1 domain | 161 | 245 | 2.2E-21 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 844 | 1105 | 4.9E-60 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 826 | 1104 | 6.93E-74 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 161 | 247 | 2.19E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 163 | 246 | 8.0E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 931 | 1127 | 1.7E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 836 | 930 | 2.4E-24 | - |
| SMART | SM00666 | PB1_new | 159 | 246 | 2.8E-33 | IPR000270 |
| SMART | SM00220 | serkin_6 | 843 | 1109 | 1.7E-52 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 843 | 1108 | 39.792168 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 968 | 980 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 849 | 874 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1077 | 1099 | 2.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 962 | 980 | 2.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1033 | 1055 | 2.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 925 | 938 | 2.4E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 803 | 826 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 594 | 628 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 471 | 547 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 804 | 818 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 523 | 547 | - | - |
| Coils | Coil | Coil | 213 | 233 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16270.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_018440211.1 | PREDICTED: uncharacterized protein LOC108812449 [Raphanus sativus] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0JYJ9 | uncharacterized protein LOC108812449 OS=Raphanus sativus OX=3726 GN=LOC108812449 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology