Basic Information
Locus ID:
BniB03g025600.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 11627052 | 11628428 | + | BniB03g025600.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 37,864.36 Da | 43.82 | 87.24 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 76 | 318 | 6.1E-23 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 89 | 320 | 2.14E-37 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 20 | 133 | 2.0E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 134 | 326 | 1.9E-31 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 23 | 323 | 18.478098 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G11410.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_022573402.2 | putative inactive serine/threonine-protein kinase At5g11400 [Brassica napus] | 0 |
| Q9LFL7 | Inactive serine/threonine-protein kinase BKN1 OS=Arabidopsis thaliana OX=3702 GN=BKN1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8X8B4Y1 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_014585 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10002608m.g.v1.0, Thhalv10014783m.g.v1.0 |
| Brassicaceae | Brassica nigra | 1 | BniB03g025600.2N |