Basic Information
Locus ID:
BniB03g025060.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Ring finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 11300003 | 11300440 | + | BniB03g025060.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.07 | 15,972.74 Da | 41.29 | 61.17 | -0.98 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 86 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 115 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_013627498.1 | PREDICTED: probable E3 ubiquitin protein ligase DRIPH [Brassica oleracea var. oleracea] | 0 |
| TrEMBL | A0A8X7W3A4 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_014633 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G23060.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10022423m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp3g20730.v2.2, Sp3g20740.v2.2 |
| Brassicaceae | Brassica nigra | 4 | BniB03g025000.2N, BniB03g025060.2N, BniB03g025070.2N ... |