Basic Information
Locus ID:
BniB03g024530.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
kinase) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 11026182 | 11028492 | + | BniB03g024530.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.43 | 46,342.29 Da | 49.55 | 79.44 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 156 | 385 | 1.35462E-117 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 155 | 385 | 1.6E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 92 | 383 | 5.93E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 211 | 407 | 2.2E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 114 | 210 | 5.6E-20 | - |
| SMART | SM00220 | serkin_6 | 125 | 393 | 8.9E-47 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 125 | 393 | 39.028934 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 252 | 264 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 246 | 264 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 312 | 334 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 293 | 303 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 356 | 378 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 207 | 220 | 2.6E-12 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06620.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_033143220.1 | probable serine/threonine-protein kinase SIS8 [Brassica rapa] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3P6AAY1 | (field mustard) hypothetical protein OS=Brassica campestris OX=3711 GN=BRAA03T12656Z PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology