Basic Information
Locus ID:
BniB03g023610.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
recA homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 10658210 | 10660178 | + | BniB03g023610.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.32 | 45,549.45 Da | 32.90 | 96.98 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 93 | 355 | 2.4E-81 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 115 | 348 | 4.94E-39 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 119 | 414 | 5.7E-85 | IPR027417 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 120 | 279 | 24.258556 | IPR020588 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 286 | 360 | 17.171907 | IPR020587 |
| PRINTS | PR00142 | RecA protein signature | 178 | 207 | 3.5E-56 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 298 | 326 | 3.5E-56 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 250 | 279 | 3.5E-56 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 331 | 360 | 3.5E-56 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 212 | 241 | 3.5E-56 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 384 | 401 | 3.5E-56 | IPR013765 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_018492807.1 | PREDICTED: DNA repair protein recA homolog 2, mitochondrial [Raphanus sativus] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7VX66 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_011571 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology