Basic Information
Locus ID:
BniB03g022290.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
amino acid transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 10017114 | 10024294 | + | BniB03g022290.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.57 | 65,068.29 Da | 29.28 | 101.97 | 0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13520 | Amino acid permease | 74 | 469 | 1.1E-46 | IPR002293 |
| Pfam | PF13906 | C-terminus of AA_permease | 513 | 562 | 9.4E-18 | IPR029485 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 68 | 502 | 1.4E-95 | - |
| PIRSF | PIRSF006060 | AA_transporter | 50 | 510 | 4.3E-71 | - |
| PIRSF | PIRSF006060 | AA_transporter | 457 | 582 | 420.0 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21120.1 | amino acid transporter 1. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. | 0 |
| RefSeq | XP_018450189.1 | PREDICTED: cationic amino acid transporter 1-like [Raphanus sativus] | 0 |
| Q84MA5 | Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0KSY8 | cationic amino acid transporter 1-like OS=Raphanus sativus OX=3726 GN=LOC108821698 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology