Basic Information
Locus ID:
BniB03g021820.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 9817538 | 9820992 | - | BniB03g021820.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.28 | 77,601.20 Da | 34.74 | 89.13 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 412 | 683 | 3.93056E-89 | - |
| Pfam | PF13855 | Leucine rich repeat | 128 | 188 | 1.1E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 79 | 9.7E-10 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 408 | 680 | 3.4E-44 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 250 | 7.65E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 383 | 680 | 1.15E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 367 | 483 | 4.9E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 484 | 707 | 1.9E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 267 | 1.6E-47 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 406 | 683 | 38.011284 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 351 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_018450762.1 | PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8 [Raphanus sativus] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0KS56 | protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Raphanus sativus OX=3726 GN=LOC108822228 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology