Basic Information
Locus ID:
BniB03g016010.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 6856071 | 6858847 | - | BniB03g016010.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.44 | 63,182.71 Da | 40.68 | 71.66 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 114 | 479 | 0.0 | - |
| Pfam | PF00433 | Protein kinase C terminal domain | 434 | 478 | 5.7E-7 | IPR017892 |
| Pfam | PF00069 | Protein kinase domain | 118 | 415 | 7.9E-64 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 93 | 466 | 9.17E-88 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 200 | 276 | 2.1E-66 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 95 | 199 | 2.1E-66 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 309 | 435 | 3.9E-43 | - |
| SMART | SM00133 | pkinase_C_6 | 416 | 480 | 3.1E-6 | IPR000961 |
| SMART | SM00220 | serkin_6 | 116 | 415 | 1.2E-102 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 416 | 488 | 13.435665 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 116 | 415 | 47.155983 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 235 | 247 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 122 | 145 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 505 | 520 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 497 | 550 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
| Coils | Coil | Coil | 65 | 102 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14350.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_013656789.2 | serine/threonine-protein kinase tricornered [Brassica napus] | 0 |
| Q9Y2H1 | Serine/threonine-protein kinase 38-like OS=Homo sapiens OX=9606 GN=STK38L PE=1 SV=3 | 0 | |
| TrEMBL | A0A8X7P2L9 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_095846 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology