Basic Information
Locus ID:
BniB03g015800.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 6770129 | 6773963 | - | BniB03g015800.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 65,697.95 Da | 48.98 | 84.53 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 301 | 544 | 6.03885E-146 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 295 | 544 | 6.3E-74 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 273 | 543 | 8.41E-86 | IPR011009 |
| SUPERFAMILY | SSF55021 | ACT-like | 177 | 252 | 9.58E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 373 | 564 | 9.9E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 285 | 372 | 5.4E-29 | - |
| Gene3D | G3DSA:3.30.70.260 | - | 180 | 253 | 6.6E-6 | - |
| SMART | SM00220 | serkin_6 | 295 | 548 | 2.1E-70 | IPR000719 |
| ProSiteProfiles | PS51671 | ACT domain profile. | 180 | 254 | 12.925817 | IPR002912 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 295 | 548 | 45.841522 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 412 | 424 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 515 | 537 | 3.8E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 452 | 462 | 3.8E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 406 | 424 | 3.8E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 369 | 382 | 3.8E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 471 | 493 | 3.8E-16 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 548 | 580 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 548 | 562 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 142 | - | - |
| Coils | Coil | Coil | 537 | 557 | - | - |
| Coils | Coil | Coil | 230 | 250 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38470.1 | ACT-like protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_018450227.1 | PREDICTED: serine/threonine-protein kinase STY46 isoform X1 [Raphanus sativus] | 0 |
| F4JTP5 | Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana OX=3702 GN=STY46 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7UVB3 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_037700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology