Basic Information
Locus ID:
BniB03g013310.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
kinase) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 5550336 | 5553701 | + | BniB03g013310.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 65,082.16 Da | 46.52 | 82.07 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 306 | 545 | 2.20986E-139 | - |
| CDD | cd04928 | ACT_TyrKc | 183 | 250 | 7.87073E-35 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 297 | 545 | 1.4E-72 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 274 | 545 | 1.24E-82 | IPR011009 |
| SUPERFAMILY | SSF55021 | ACT-like | 183 | 252 | 2.17E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 286 | 375 | 8.1E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 376 | 567 | 1.9E-60 | - |
| SMART | SM00220 | serkin_6 | 297 | 550 | 7.6E-66 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 297 | 550 | 45.148956 | IPR000719 |
| ProSiteProfiles | PS51671 | ACT domain profile. | 185 | 259 | 14.103779 | IPR002912 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 414 | 426 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 473 | 495 | 2.3E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 454 | 464 | 2.3E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 408 | 426 | 2.3E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 371 | 384 | 2.3E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 517 | 539 | 2.3E-17 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 554 | 568 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 554 | 575 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 118 | 142 | - | - |
| Coils | Coil | Coil | 235 | 255 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35780.1 | ACT-like protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_018450394.1 | PREDICTED: serine/threonine-protein kinase STY17 isoform X1 [Raphanus sativus] | 0 |
| Q8RWL6 | Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana OX=3702 GN=STY17 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7TI80 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_095476 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology