halophFGD

Basic Information

Locus ID: BniB03g012620.2N

Species & Taxonomic ID: Brassica nigra & 3710

Genome Assembly: N100

Description: Belongs to the glucose-6-phosphate 1-epimerase family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
B3	5199448	5202829	-	BniB03g012620.2N

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.84	29,908.26 Da	21.50	89.24	-0.28

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF01263	Aldose 1-epimerase	111	257	7.2E-24	IPR008183
Pfam	PF01263	Aldose 1-epimerase	38	110	4.4E-13	IPR008183
SUPERFAMILY	SSF74650	Galactose mutarotase-like	32	254	1.57E-52	IPR011013
Gene3D	G3DSA:2.70.98.10	-	111	259	4.0E-37	IPR014718
Gene3D	G3DSA:2.70.98.10	-	23	110	3.3E-25	IPR014718
PIRSF	PIRSF016020	PHexose_mutarotase	25	111	1.4E-17	IPR025532
PIRSF	PIRSF016020	PHexose_mutarotase	109	259	3.5E-21	IPR025532

Gene Ontology

Biological Process:

GO:0005975 (carbohydrate metabolic process)

Molecular Function:

GO:0003824 (catalytic activity) GO:0016853 (isomerase activity) GO:0030246 (carbohydrate binding)

KEGG Pathway

KO Term:

K01792 (glucose-6-phosphate 1-epimerase [EC:5.1.3.15])

Pathway:

ko00010 (Glycolysis / Gluconeogenesis) map00010 (Glycolysis / Gluconeogenesis) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites) ko01120 (Microbial metabolism in diverse environments) map01120 (Microbial metabolism in diverse environments)

Reaction:

R02739 (alpha-D-Glucose 6-phosphate <=> beta-D-Glucose 6-phosphate)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G25900.1	Galactose mutarotase-like superfamily protein.
RefSeq	XP_013600073.1	PREDICTED: putative glucose-6-phosphate 1-epimerase [Brassica oleracea var. oleracea]
Swiss-Prot	Q40784	Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris OX=35872 PE=2 SV=1
TrEMBL	A0A8X7VZ03	Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_012488 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	9	jg17764, jg19863, jg23529, jg26905, jg29420, jg30465, jg4108 ... jg37042, jg40398
Aizoaceae	Mesembryanthemum crystallinum	4	gene_10802, gene_1658, gene_17494, gene_1784
Amaranthaceae	Atriplex hortensis	4	Ah004506, Ah014756, Ah022899, Ah037209
Amaranthaceae	Beta vulgaris	4	BVRB_1g003620, BVRB_5g099470, BVRB_6g143920, BVRB_8g198340
Amaranthaceae	Salicornia bigelovii	8	Sbi_jg23985, Sbi_jg25156, Sbi_jg4010, Sbi_jg42040 ... Sbi_jg48097, Sbi_jg49217, Sbi_jg7809, Sbi_jg8998
Amaranthaceae	Salicornia europaea	4	Seu_jg12219, Seu_jg19594, Seu_jg27458, Seu_jg6023
Amaranthaceae	Suaeda aralocaspica	4	GOSA_00000536, GOSA_00001097, GOSA_00007644, GOSA_00008876
Amaranthaceae	Suaeda glauca	9	Sgl10977, Sgl11083, Sgl16376, Sgl31622, Sgl36933, Sgl42434 ... Sgl47163, Sgl52148, Sgl57421
Amaranthaceae	Chenopodium album	13	gene:ENSEOMG00000002257, gene:ENSEOMG00000002330 ... gene:ENSEOMG00000005453, gene:ENSEOMG00000011572, gene:ENSEOMG00000013687, gene:ENSEOMG00000022220, gene:ENSEOMG00000025677, gene:ENSEOMG00000026701, gene:ENSEOMG00000033199, gene:ENSEOMG00000034610, gene:ENSEOMG00000035617, gene:ENSEOMG00000047870, gene:ENSEOMG00000050224
Amaranthaceae	Chenopodium quinoa	6	CQ.Regalona.r1.2BG0025770, CQ.Regalona.r1.5AG0006350 ... CQ.Regalona.r1.5BG0006630, CQ.Regalona.r1.6AG0011050, CQ.Regalona.r1.8AG0018460, CQ.Regalona.r1.8BG0023920
Anacardiaceae	Pistacia vera	6	pistato.v30005360, pistato.v30023140, pistato.v30130190 ... pistato.v30130800, pistato.v30134940, pistato.v30263090
Apiaceae	Apium graveolens	5	Ag11G05047, Ag3G00877, Ag4G00759, Ag4G02242, Ag8G00602
Arecaceae	Cocos nucifera	6	COCNU_01G008410, COCNU_02G018700, COCNU_06G003200 ... COCNU_11G009560, COCNU_11G012890, COCNU_14G001820
Arecaceae	Phoenix dactylifera	3	gene-LOC103701526, gene-LOC103707075, gene-LOC103708356
Asparagaceae	Asparagus officinalis	4	AsparagusV1_01.54.V1.1, AsparagusV1_05.2441.V1.1 ... AsparagusV1_05.2716.V1.1, AsparagusV1_05.3499.V1.1
Asteraceae	Flaveria trinervia	10	Ftri11G23872, Ftri13G04076, Ftri14G27108, Ftri15G03410 ... Ftri15G08299, Ftri15G32552, Ftri18G05830, Ftri3G26990, Ftri4G01046, Ftri8G09870
Brassicaceae	Arabidopsis thaliana	6	AT3G01590.2, AT3G61610.1, AT4G23730.1, AT4G25900.1 ... AT5G14500.1, AT5G57330.1
Brassicaceae	Eutrema salsugineum	7	Thhalv10006104m.g.v1.0, Thhalv10014164m.g.v1.0 ... Thhalv10014200m.g.v1.0, Thhalv10021199m.g.v1.0, Thhalv10025755m.g.v1.0, Thhalv10025817m.g.v1.0, Thhalv10026020m.g.v1.0
Brassicaceae	Schrenkiella parvula	6	Sp3g00460.v2.2, Sp5g01800.v2.2, Sp6g19050.v2.2 ... Sp6g29510.v2.2, Sp7g21670.v2.2, Sp7g23920.v2.2
Brassicaceae	Brassica nigra	13	BniB02g036680.2N, BniB02g080720.2N, BniB03g012620.2N ... BniB05g001850.2N, BniB05g011480.2N, BniB05g013440.2N, BniB05g036900.2N, BniB06g053080.2N, BniB07g035180.2N, BniB08g006990.2N, BniB08g013860.2N, BniB08g075750.2N, BniB08g075880.2N
Casuarinaceae	Casuarina equisetifolia	5	Ceq02G1223, Ceq02G1896, Ceq03G0219, Ceq03G1110, Ceq05G0650
Casuarinaceae	Casuarina glauca	5	Cgl02G1263, Cgl02G1973, Cgl03G0260, Cgl03G1202, Cgl05G0663
Cymodoceaceae	Cymodocea nodosa	6	gene.Cymno02g12790, gene.Cymno04g01270, gene.Cymno06g06760 ... gene.Cymno07g04830, gene.Cymno07g12540, gene.Cymno08g00890
Dunaliellaceae	Dunaliella salina	1	Dusal.0115s00012.v1.0
Hydrocharitaceae	Thalassia testudinum	6	gene.Thate02g25640, gene.Thate03g22510, gene.Thate04g22680 ... gene.Thate05g05800, gene.Thate07g16140, gene.Thate09g00630
Malvaceae	Hibiscus hamabo Siebold & Zucc.	7	nbisL1-mrna-11219, nbisL1-mrna-2269, nbisL1-mrna-2448 ... nbisL1-mrna-2461, nbisL1-mrna-3364, nbisL1-mrna-4654, nbisL1-mrna-846
Nitrariaceae	Nitraria sibirica	5	evm.TU.LG01.702, evm.TU.LG04.760, evm.TU.LG05.282 ... evm.TU.LG07.64, evm.TU.LG10.1491
Plantaginaceae	Plantago ovata	3	Pov_00017331, Pov_00024178, Pov_00028419
Plumbaginaceae	Limonium bicolor	3	Lb2G11199, Lb2G11201, Lb3G17122
Poaceae	Echinochloa crus-galli	15	AH02.2597, AH05.1339, AH07.549, AH08.802, AH09.2203 ... BH02.2698, BH05.1510, BH07.675, BH08.847, BH09.2374, CH02.3840, CH05.1710, CH07.555, CH08.935, CH09.2522
Poaceae	Eleusine coracana subsp. coracana	10	gene-QOZ80_1AG0027240, gene-QOZ80_1BG0077440 ... gene-QOZ80_2AG0103460, gene-QOZ80_2BG0156770, gene-QOZ80_4AG0300970, gene-QOZ80_4BG0331710, gene-QOZ80_5AG0362590, gene-QOZ80_5BG0410760, gene-QOZ80_8AG0623500, gene-QOZ80_8BG0651730
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.1HG0090330.1, HORVU.MOREX.r3.2HG0193070.1 ... HORVU.MOREX.r3.2HG0202520.1, HORVU.MOREX.r3.6HG0570230.1, HORVU.MOREX.r3.7HG0694820.1
Poaceae	Lolium multiflorum	5	gene-QYE76_020917, gene-QYE76_021009, gene-QYE76_032393 ... gene-QYE76_046126, gene-QYE76_047045
Poaceae	Oryza coarctata	11	Oco01G016250, Oco02G016480, Oco03G003840, Oco04G003770 ... Oco07G015140, Oco07G017960, Oco08G014640, Oco08G017330, Oco09G017130, Oco15G004790, Oco16G004490
Poaceae	Oryza sativa	6	LOC_Os01g46950.1, LOC_Os02g08030.1, LOC_Os04g51390.1 ... LOC_Os04g56290.1, LOC_Os05g49430.1, LOC_Os08g14330.2
Poaceae	Paspalum vaginatum	5	gene-BS78_03G217600, gene-BS78_04G056900 ... gene-BS78_06G266200, gene-BS78_07G093400, gene-BS78_09G241300
Poaceae	Puccinellia tenuiflora	7	Pt_Chr0202364, Pt_Chr0300545, Pt_Chr0300567, Pt_Chr0301411 ... Pt_Chr0402618, Pt_Chr0502948, Pt_Chr0505610
Poaceae	Sporobolus alterniflorus	13	Chr02G013830, Chr03G012190, Chr08G012470, Chr0G027820 ... Chr16G003170, Chr17G002750, Chr18G016610, Chr20G009600, Chr22G000860, Chr25G001600, Chr26G017300, Chr29G009300, Chr30G001600
Poaceae	Thinopyrum elongatum	5	Tel1E01G677700, Tel2E01G738700, Tel2E01G848400 ... Tel6E01G312700, Tel7E01G496900
Poaceae	Triticum dicoccoides	10	gene_TRIDC1AG060350, gene_TRIDC1BG069110 ... gene_TRIDC2AG062850, gene_TRIDC2AG070530, gene_TRIDC2BG066560, gene_TRIDC2BG076260, gene_TRIDC6AG021140, gene_TRIDC6BG027030, gene_TRIDC7AG040040, gene_TRIDC7BG030250
Poaceae	Triticum aestivum	15	TraesCS1A02G409900.1, TraesCS1B02G439900.1 ... TraesCS1D02G417300.1, TraesCS2A02G437100.1, TraesCS2A02G501600.1, TraesCS2B02G456200.2, TraesCS2B02G529800.1, TraesCS2D02G432900.1, TraesCS2D02G502100.1, TraesCS6A02G152400.1, TraesCS6B02G180500.1, TraesCS6D02G142200.1, TraesCS7A02G288900.1, TraesCS7B02G185300.2, TraesCS7D02G292700.1
Poaceae	Zea mays	6	Zm00001eb067700_P001, Zm00001eb157870_P002 ... Zm00001eb178250_P001, Zm00001eb206840_P001, Zm00001eb296350_P001, Zm00001eb414550_P001
Poaceae	Zoysia japonica	5	nbis-gene-13617, nbis-gene-23081, nbis-gene-24814 ... nbis-gene-25972, nbis-gene-53679
Poaceae	Zoysia macrostachya	9	Zma_g10795, Zma_g15044, Zma_g20598, Zma_g21920, Zma_g22131 ... Zma_g22682, Zma_g23820, Zma_g27410, Zma_g28830
Portulacaceae	Portulaca oleracea	10	evm.TU.LG02.2725, evm.TU.LG04.2204, evm.TU.LG04.3306 ... evm.TU.LG06.102, evm.TU.LG10.428, evm.TU.LG16.294, evm.TU.LG17.425, evm.TU.LG19.1237, evm.TU.LG23.935, evm.TU.LG24.1253
Posidoniaceae	Posidonia oceanica	4	gene.Posoc01g06820, gene.Posoc03g14570, gene.Posoc05g02650 ... gene.Posoc08g14060
Rhizophoraceae	Bruguiera sexangula	6	evm.TU.Scaffold_10_RagTag.285, evm.TU.Scaffold_14_RagTag.133 ... evm.TU.Scaffold_16_RagTag.111, evm.TU.Scaffold_3_RagTag.1935, evm.TU.Scaffold_4_RagTag.2032, evm.TU.Scaffold_9_RagTag.574
Rhizophoraceae	Carallia pectinifolia	6	nbisL1-mrna-13282, nbisL1-mrna-21692, nbisL1-mrna-22356 ... nbisL1-mrna-2413, nbisL1-mrna-25457, nbisL1-mrna-2562
Rhizophoraceae	Ceriops tagal	6	nbisL1-mrna-12605, nbisL1-mrna-2883, nbisL1-mrna-3684 ... nbisL1-mrna-4395, nbisL1-mrna-6777, nbisL1-mrna-7821
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-20371, nbisL1-mrna-3099, nbisL1-mrna-7375 ... nbisL1-mrna-8599
Rhizophoraceae	Kandelia candel	6	evm.TU.utg000003l.226, evm.TU.utg000007l.315 ... evm.TU.utg000008l.1180, evm.TU.utg000019l.57, evm.TU.utg000022l.425, evm.TU.utg000033l.190
Rhizophoraceae	Kandelia obovata	6	Maker00000166, Maker00001698, Maker00014237, Maker00014683 ... Maker00017734, Maker00018456
Rhizophoraceae	Rhizophora apiculata	6	nbisL1-mrna-12027, nbisL1-mrna-14251, nbisL1-mrna-15988 ... nbisL1-mrna-16579, nbisL1-mrna-1723, nbisL1-mrna-3566
Rhizophoraceae	Rhizophora mangle	6	nbisL1-mrna-10961, nbisL1-mrna-14670, nbisL1-mrna-19580 ... nbisL1-mrna-20973, nbisL1-mrna-5466, nbisL1-mrna-6735
Salicaceae	Populus euphratica	9	populus_peu01108, populus_peu03647, populus_peu04154 ... populus_peu05287, populus_peu05290, populus_peu05360, populus_peu05414, populus_peu31596, populus_peu34983
Solanaceae	Lycium barbarum	4	gene-LOC132603372, gene-LOC132621580, gene-LOC132634823 ... gene-LOC132645490
Solanaceae	Solanum chilense	5	SOLCI002687600, SOLCI003540000, SOLCI003906500 ... SOLCI004254000, SOLCI005351200
Solanaceae	Solanum pennellii	5	gene-LOC107007926, gene-LOC107008938, gene-LOC107026328 ... gene-LOC107028741, gene-LOC107032365
Tamaricaceae	Reaumuria soongarica	6	STRG.14720_chr08_+, STRG.23275_chr05_+, STRG.23368_chr05_- ... gene_1385, gene_15202, gene_928
Tamaricaceae	Tamarix chinensis	7	TC01G3563, TC01G4242, TC03G1004, TC03G2157, TC09G2300 ... TC10G0828, TC12G0488
Zosteraceae	Zostera marina	6	Zosma02g11490.v3.1, Zosma02g22810.v3.1, Zosma03g00510.v3.1 ... Zosma03g18980.v3.1, Zosma04g00930.v3.1, Zosma04g06810.v3.1