Basic Information
Locus ID:
BniB03g010000.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
CONTAINS InterPro DOMAIN s Targeting for Xklp2 (InterPro IPR009675)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 4051269 | 4053172 | - | BniB03g010000.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 46,698.35 Da | 42.77 | 55.81 | -1.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 209 | 293 | 2.1E-26 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 259 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 209 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 430 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 384 | 404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 362 | 382 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 167 | 182 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 406 | 430 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 96 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 126 | 148 | - | - |
| Coils | Coil | Coil | 224 | 254 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_013621887.1 | PREDICTED: protein WVD2-like 1 isoform X2 [Brassica oleracea var. oleracea] | 0 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VZC6 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_012741 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology