Basic Information
Locus ID:
BniB03g009260.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 3672995 | 3675806 | - | BniB03g009260.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.87 | 80,053.24 Da | 43.07 | 87.75 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00293 | USP_Like | 19 | 108 | 4.0406E-5 | - |
| Pfam | PF00069 | Protein kinase domain | 362 | 625 | 5.1E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 338 | 629 | 7.42E-75 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 11 | 134 | 5.55E-6 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 10 | 139 | 4.8E-6 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 328 | 432 | 4.9E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 433 | 657 | 1.6E-54 | - |
| SMART | SM00220 | serkin_6 | 358 | 629 | 5.2E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 358 | 636 | 36.979504 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 364 | 386 | - | IPR017441 |
| Coils | Coil | Coil | 626 | 656 | - | - |
| Coils | Coil | Coil | 169 | 189 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21590.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_018462519.1 | PREDICTED: proline-rich receptor-like protein kinase PERK13 [Raphanus sativus] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | A0A6J0LRR3 | proline-rich receptor-like protein kinase PERK13 OS=Raphanus sativus OX=3726 GN=LOC108833610 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology