Basic Information
Locus ID:
BniB03g007210.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
phosphatase 2A 55 kDa regulatory subunit B
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 2843994 | 2847883 | - | BniB03g007210.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 56,061.10 Da | 52.46 | 68.94 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 213 | 249 | 0.054 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 332 | 357 | 0.19 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 34 | 494 | 1.58E-36 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 67 | 499 | 1.6E-28 | IPR015943 |
| SMART | SM00320 | WD40_4 | 99 | 139 | 37.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 260 | 300 | 21.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 319 | 357 | 92.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 210 | 249 | 0.78 | IPR001680 |
| SMART | SM00320 | WD40_4 | 26 | 61 | 4.2 | IPR001680 |
| PIRSF | PIRSF037309 | PPA2_B55 | 6 | 501 | 1.3E-199 | IPR000009 |
| ProSitePatterns | PS01025 | Protein phosphatase 2A regulatory subunit PR55 signature 2. | 219 | 233 | - | IPR018067 |
| ProSitePatterns | PS01024 | Protein phosphatase 2A regulatory subunit PR55 signature 1. | 99 | 113 | - | IPR018067 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 221 | 248 | 1.9E-159 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 277 | 305 | 1.9E-159 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 115 | 143 | 1.9E-159 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 334 | 361 | 1.9E-159 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 249 | 276 | 1.9E-159 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 40 | 60 | 1.9E-159 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 362 | 387 | 1.9E-159 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 306 | 333 | 1.9E-159 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 388 | 414 | 1.9E-159 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 470 | 499 | 1.9E-159 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 86 | 114 | 1.9E-159 | IPR000009 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 149 | 169 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17720.2 | Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B | 0 |
| RefSeq | XP_018461061.1 | PREDICTED: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like [Raphanus sativus] | 0 |
| Q39247 | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Arabidopsis thaliana OX=3702 GN=PP2AB2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0KJJ1 | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Raphanus sativus OX=3726 GN=LOC108819563 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology