Basic Information
Locus ID:
BniB03g007150.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 2814143 | 2817047 | - | BniB03g007150.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 77,925.24 Da | 49.90 | 82.58 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 406 | 659 | 2.80338E-85 | - |
| CDD | cd01989 | STK_N | 14 | 152 | 8.75578E-56 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 405 | 658 | 1.4E-39 | IPR001245 |
| Pfam | PF00582 | Universal stress protein family | 17 | 142 | 1.1E-6 | IPR006016 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 381 | 659 | 1.48E-66 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 17 | 150 | 3.77E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 473 | 683 | 1.5E-48 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 15 | 153 | 1.9E-11 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 369 | 472 | 1.7E-24 | - |
| SMART | SM00220 | serkin_6 | 400 | 663 | 1.1E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 400 | 663 | 34.180973 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 518 | 530 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 236 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 236 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 681 | 703 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 280 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 677 | 703 | - | - |
| Coils | Coil | Coil | 316 | 336 | - | - |
| Coils | Coil | Coil | 275 | 302 | - | - |
| Coils | Coil | Coil | 350 | 380 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17540.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_013603120.1 | PREDICTED: U-box domain-containing protein 35-like [Brassica oleracea var. oleracea] | 0 |
| Q9FKG5 | U-box domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=PUB51 PE=2 SV=2 | 0 | |
| TrEMBL | A0A817AFD4 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=DARMORV10_A08P30840.1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology