Basic Information
Locus ID:
BniB03g005870.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
WRKY4
Description:
Transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 2345367 | 2347363 | + | BniB03g005870.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 51,329.38 Da | 61.04 | 57.16 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 371 | 428 | 3.0E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 210 | 266 | 1.6E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 208 | 268 | 1.16E-25 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 362 | 430 | 1.31E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 196 | 269 | 6.8E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 355 | 431 | 2.4E-36 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 370 | 429 | 3.2E-39 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 209 | 267 | 2.8E-37 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 365 | 430 | 38.044201 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 210 | 268 | 24.432003 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 463 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 278 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 471 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_013677803.2 | probable WRKY transcription factor 4 [Brassica napus] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7VXN1 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_013117 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology