Basic Information
Locus ID:
BniB03g001740.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Peptidase S24 S26A S26B S26C family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 720863 | 722376 | + | BniB03g001740.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 23,357.25 Da | 29.51 | 87.07 | -0.35 |
Protein Domain:
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06200.1 | Peptidase S24/S26A/S26B/S26C family protein. | 0 |
| RefSeq | XP_009111004.1 | mitochondrial inner membrane protease subunit 2-like [Brassica rapa] | 0 |
| Q84VZ6 | Mitochondrial ATP-independent inner membrane protease subunit 2 OS=Arabidopsis thaliana OX=3702 GN=IMP1B PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7W0S8 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_013431 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg16195, jg35423, jg37814, jg8693 |
| Aizoaceae | Mesembryanthemum crystallinum | 4 | gene_19290, gene_2744, gene_3029, gene_3030 |
| Amaranthaceae | Atriplex hortensis | 3 | Ah000149, Ah018340, Ah018341 |
| Amaranthaceae | Beta vulgaris | 3 | BVRB_3g048940, BVRB_3g048960, BVRB_5g121430 |
| Amaranthaceae | Salicornia bigelovii | 4 | Sbi_jg31384, Sbi_jg37832, Sbi_jg57883, Sbi_jg5978 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg25515, Seu_jg28141 |
| Amaranthaceae | Suaeda aralocaspica | 3 | GOSA_00006111, GOSA_00006112, GOSA_00026720 |
| Amaranthaceae | Suaeda glauca | 8 | Sgl00978, Sgl00980, Sgl05933, Sgl06037, Sgl06045, Sgl06053 ... |
| Amaranthaceae | Chenopodium album | 9 | gene:ENSEOMG00000001160, gene:ENSEOMG00000003538 ... |
| Amaranthaceae | Chenopodium quinoa | 5 | CQ.Regalona.r1.3AG0008110, CQ.Regalona.r1.3AG0008120 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30016300 |
| Apiaceae | Apium graveolens | 2 | Ag10G00891, Ag2G01326 |
| Arecaceae | Cocos nucifera | 1 | COCNU_08G011910 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103721924, gene-LOC120104375 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_01.812.V1.1, AsparagusV1_Unassigned.74.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri15G33140 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G06200.1, AT2G31140.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10008791m.g.v1.0, Thhalv10017243m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp1g05010.v2.2, Sp4g13620.v2.2 |
| Brassicaceae | Brassica nigra | 5 | BniB01g012930.2N, BniB01g012940.2N, BniB03g001740.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G1328 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G1395 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno02g07500 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0116s00002.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate03g24340, gene.Thate08g00260 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-9713 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.1355 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00024622 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb2G10276, Lb2G11663 |
| Poaceae | Echinochloa crus-galli | 3 | AH09.24, BH09.98, CH09.66 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0319820, gene-QOZ80_4BG0351230 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0100860.1 |
| Poaceae | Oryza coarctata | 2 | Oco07G001160, Oco08G000080 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g01240.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_04G313500, gene-BS78_06G003400 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0305972 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr23G019240, Chr25G016870, Chr26G000720, Chr30G014510 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G102400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG004400, gene_TRIDC2BG005000 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G041900.1, TraesCS2B02G054400.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb089650_P001, Zm00001eb418960_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-46855 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g19207, Zma_g20772, Zma_g20774 |
| Portulacaceae | Portulaca oleracea | 6 | evm.TU.LG01.2928, evm.TU.LG02.1214, evm.TU.LG02.1215 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g17000 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_5_RagTag.1103, evm.TU.Scaffold_9_RagTag.1005 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-11571, nbisL1-mrna-21180 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-17964, nbisL1-mrna-6162 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-10288, nbisL1-mrna-18304 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000003l.462, evm.TU.utg000006l.378 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00009270, Maker00013090 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-1449, nbisL1-mrna-9911 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-19814, nbisL1-mrna-5043 |
| Salicaceae | Populus euphratica | 2 | populus_peu15195, populus_peu32863 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132610541 |
| Solanaceae | Solanum chilense | 1 | SOLCI003796200 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107029142 |
| Tamaricaceae | Reaumuria soongarica | 3 | STRG.2289_chr01_+, gene_12574, gene_17441 |
| Tamaricaceae | Tamarix chinensis | 3 | TC01G0895, TC05G1716, TC07G2411 |
| Zosteraceae | Zostera marina | 1 | Zosma06g28750.v3.1 |