Basic Information
Locus ID:
BniB03g001480.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
BTB POZ and TAZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B3 | 644853 | 646299 | + | BniB03g001480.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.78 | 45,118.54 Da | 56.32 | 77.64 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 194 | 235 | 8.58442E-4 | - |
| Pfam | PF02135 | TAZ zinc finger | 278 | 360 | 1.1E-10 | IPR000197 |
| Pfam | PF00651 | BTB/POZ domain | 83 | 190 | 1.0E-12 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 75 | 189 | 3.92E-15 | IPR011333 |
| SUPERFAMILY | SSF57933 | TAZ domain | 270 | 369 | 1.57E-18 | IPR035898 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 66 | 192 | 3.4E-19 | IPR011333 |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 266 | 388 | 5.9E-18 | IPR035898 |
| Gene3D | G3DSA:1.25.40.420 | - | 193 | 265 | 4.3E-10 | - |
| SMART | SM00225 | BTB_4 | 92 | 192 | 3.1E-8 | IPR000210 |
| SMART | SM00551 | TAZ_2 | 269 | 361 | 2.4E-27 | IPR000197 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 92 | 160 | 10.571548 | IPR000210 |
| ProSiteProfiles | PS50134 | Zinc finger TAZ-type profile. | 266 | 363 | 8.597926 | IPR000197 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 40 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05690.1 | BTB and TAZ domain protein 3. BTB and TAZ domain protein. Acts redunantly with BT1 and BT2 during female gametophyte development. Acts with BT2 during male gametophyte development. | 0 |
| RefSeq | XP_018447250.1 | PREDICTED: BTB/POZ and TAZ domain-containing protein 3-like [Raphanus sativus] | 0 |
| Q9SYL0 | BTB/POZ and TAZ domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BT3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6J0KH17 | BTB/POZ and TAZ domain-containing protein 3-like OS=Raphanus sativus OX=3726 GN=LOC108818824 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology