Basic Information
Locus ID:
BniB02g087560.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 69801023 | 69802665 | + | BniB02g087560.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.74 | 49,659.31 Da | 39.43 | 78.82 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 27 | 418 | 5.29472E-178 | - |
| Pfam | PF00069 | Protein kinase domain | 39 | 178 | 3.0E-21 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 257 | 418 | 9.4E-24 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 32 | 419 | 1.24E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 92 | 418 | 1.2E-119 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 24 | 123 | 1.2E-119 | - |
| SMART | SM00220 | serkin_6 | 38 | 418 | 4.7E-63 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 38 | 418 | 34.675663 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 44 | 67 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 165 | 177 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35500.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018477040.1 | PREDICTED: probable serine/threonine-protein kinase sky1 [Raphanus sativus] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0MX47 | probable serine/threonine-protein kinase sky1 OS=Raphanus sativus OX=3726 GN=LOC108848228 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology