Basic Information
Locus ID:
BniB02g085840.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
CONTAINS InterPro DOMAIN s Targeting for Xklp2 (InterPro IPR009675)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 69055547 | 69057482 | + | BniB02g085840.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 45,794.64 Da | 39.55 | 58.01 | -1.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 206 | 287 | 1.2E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 178 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 374 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 426 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 256 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 426 | - | - |
| Coils | Coil | Coil | 221 | 251 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_018480244.1 | PREDICTED: protein WVD2-like 5 isoform X1 [Raphanus sativus] | 0 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7P209 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_093699 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology