Basic Information
Locus ID:
BniB02g085620.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Has 114836 Blast hits to 56273 proteins in 1914 species Archae - 187
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 68959328 | 68963535 | - | BniB02g085620.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 93,371.31 Da | 53.99 | 62.11 | -0.99 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 616 | 657 | 1.2E-5 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 33 | 223 | 3.5E-7 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 608 | 665 | 5.7E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 663 | 856 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 320 | 394 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 508 | 543 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 398 | 434 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 561 | 612 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 620 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 663 | 706 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 486 | 507 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 771 | 795 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 728 | 755 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 817 | 833 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_013598259.1 | PREDICTED: nucleolar and coiled-body phosphoprotein 1-like isoform X3 [Brassica oleracea var. oleracea] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A816N709 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=DARMORV10_C07P58970.1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology