Basic Information
Locus ID:
BniB02g085520.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
MGD1
Description:
synthase 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 68922649 | 68925029 | + | BniB02g085520.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 58,804.86 Da | 45.84 | 86.02 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17507 | GT28_Beta-DGS-like | 146 | 523 | 3.72018E-148 | - |
| Pfam | PF06925 | Monogalactosyldiacylglycerol (MGDG) synthase | 157 | 325 | 9.2E-62 | IPR009695 |
| Pfam | PF04101 | Glycosyltransferase family 28 C-terminal domain | 382 | 450 | 4.4E-11 | IPR007235 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | 144 | 521 | 1.63E-24 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 335 | 506 | 7.3E-28 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31780.2 | monogalactosyl diacylglycerol synthase 1. Encodes an A-type monogalactosyldiacylglycerol (MGDG) synthase. It represents the isoform responsible for the bulk of MGDG synthesis in Arabidopsis. | 0 |
| RefSeq | XP_009138035.2 | monogalactosyldiacylglycerol synthase 1, chloroplastic isoform X1 [Brassica rapa] | 0 |
| O81770 | Monogalactosyldiacylglycerol synthase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MGD1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7P3E0 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_093867 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology