Basic Information
Locus ID:
BniB02g085230.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 68789944 | 68792933 | - | BniB02g085230.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.50 | 85,211.59 Da | 55.06 | 78.87 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 18 | 173 | 6.20866E-61 | - |
| Pfam | PF00069 | Protein kinase domain | 476 | 732 | 3.7E-40 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 19 | 147 | 6.3E-9 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 19 | 147 | 2.85E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 459 | 734 | 1.91E-68 | IPR011009 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 19 | 148 | 5.4E-11 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 453 | 547 | 3.9E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 548 | 756 | 5.5E-51 | - |
| SMART | SM00220 | serkin_6 | 475 | 738 | 4.0E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 475 | 738 | 35.45303 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 593 | 605 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 237 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 83 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 320 | 344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 752 | 772 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 320 | 335 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 256 | - | - |
| Coils | Coil | Coil | 367 | 387 | - | - |
| Coils | Coil | Coil | 341 | 361 | - | - |
| Coils | Coil | Coil | 401 | 430 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31230.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_018485113.1 | PREDICTED: U-box domain-containing protein 35 [Raphanus sativus] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6J0NMY7 | U-box domain-containing protein 35 OS=Raphanus sativus OX=3726 GN=LOC108855728 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology