Basic Information
Locus ID:
BniB02g084800.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 68604461 | 68607377 | - | BniB02g084800.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 72,313.04 Da | 41.12 | 96.47 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 45 | 84 | 4.7E-12 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 135 | 195 | 9.6E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 314 | 578 | 9.5E-42 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 238 | 2.32E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 296 | 583 | 8.2E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 390 | 601 | 6.4E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 44 | 226 | 6.4E-55 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 283 | 389 | 4.0E-34 | - |
| SMART | SM00220 | serkin_6 | 313 | 582 | 2.8E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 313 | 600 | 35.19862 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 432 | 444 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 319 | 341 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 182 | 195 | 5.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 137 | 150 | 5.3E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_018480488.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g30520 isoform X2 [Raphanus sativus] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7P0N7 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_090311 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology