Basic Information
Locus ID:
BniB02g078280.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 65682379 | 65685476 | + | BniB02g078280.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 112,207.90 Da | 35.28 | 99.02 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 220 | 270 | 2.4E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 60 | 2.1E-7 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 111 | 131 | 0.58 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 687 | 961 | 6.7E-48 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 282 | 341 | 3.1E-10 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 370 | 1.05E-62 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 678 | 964 | 3.1E-73 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 250 | 601 | 4.32E-57 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 765 | 982 | 2.7E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 668 | 764 | 1.4E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 198 | 448 | 1.1E-70 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 449 | 632 | 8.4E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 197 | 1.3E-43 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 233 | 257 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 304 | 327 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 494 | 518 | 150.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 685 | 969 | 5.9E-26 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 85 | 109 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 542 | 566 | 27.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 685 | 969 | 36.456547 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 815 | 827 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 691 | 714 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_018462111.1 | PREDICTED: receptor-like protein kinase 5 [Raphanus sativus] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0LS03 | receptor-like protein kinase 5 OS=Raphanus sativus OX=3726 GN=LOC108833174 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology