Basic Information
Locus ID:
BniB02g077920.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
EBF2
Description:
EIN3-binding F box protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 65513640 | 65515647 | - | BniB02g077920.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.39 | 65,893.25 Da | 41.56 | 101.54 | 0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 432 | 455 | 1.1 | IPR001611 |
| Pfam | PF00646 | F-box domain | 62 | 101 | 2.9E-6 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 246 | 268 | 0.51 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 514 | 536 | 0.19 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 155 | 394 | 6.67E-33 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 279 | 622 | 1.41E-29 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 58 | 99 | 1.57E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 271 | 428 | 4.5E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 486 | 622 | 1.4E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 56 | 270 | 9.6E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 429 | 485 | 2.5E-7 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 566 | 591 | 39.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 352 | 377 | 0.093 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 326 | 351 | 1.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 168 | 193 | 0.11 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 486 | 511 | 24.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 459 | 484 | 0.014 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 220 | 245 | 0.04 | IPR006553 |
| SMART | SM00256 | fbox_2 | 65 | 105 | 9.6E-5 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 513 | 538 | 0.0017 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 433 | 458 | 0.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 194 | 219 | 6.8E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 246 | 271 | 2.6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 539 | 563 | 86.0 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25350.1 | EIN3-binding F box protein 2. Arabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway. | 0 |
| RefSeq | XP_018483723.1 | PREDICTED: EIN3-binding F-box protein 2 [Raphanus sativus] | 0 |
| Q708Y0 | EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7TL88 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_092965 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology