Basic Information
Locus ID:
BniB02g077110.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Phosphatidylinositol 4-kinase gamma
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 65050819 | 65052631 | - | BniB02g077110.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 63,811.96 Da | 41.73 | 88.30 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 112 | 184 | 5.2E-8 | IPR000626 |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 267 | 521 | 7.6E-56 | IPR000403 |
| Pfam | PF00240 | Ubiquitin family | 36 | 106 | 2.2E-6 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 80 | 184 | 2.93E-14 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 30 | 106 | 3.06E-7 | IPR029071 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 408 | 573 | 2.04E-9 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 35 | 108 | 1.7E-6 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 110 | 198 | 9.2E-10 | - |
| SMART | SM00213 | ubq_7 | 33 | 105 | 0.0035 | IPR000626 |
| SMART | SM00213 | ubq_7 | 110 | 183 | 0.053 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 110 | 187 | 11.83414 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24240.1 | Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family protein. | 0 |
| RefSeq | XP_009137529.1 | phosphatidylinositol 4-kinase gamma 3 [Brassica rapa] | 0 |
| Q9FNF8 | Phosphatidylinositol 4-kinase gamma 3 OS=Arabidopsis thaliana OX=3702 GN=PI4KG3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7NXQ1 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_090964 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology