halophFGD

Basic Information

Locus ID: BniB02g067500.2N

Species & Taxonomic ID: Brassica nigra & 3710

Genome Assembly: N100

Description: UPF0392 protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
B2	60463297	60465041	-	BniB02g067500.2N

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.91	63,917.50 Da	38.73	82.20	-0.30

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00761	Glyco_tranf_GTA_type	282	368	0.00252104	-
Pfam	PF01697	Glycosyltransferase family 92	276	490	1.3E-41	IPR008166
SUPERFAMILY	SSF53448	Nucleotide-diphospho-sugar transferases	281	401	1.97E-7	IPR029044

Best hit

Source	Best Hit ID	Description
TAIR	AT3G27330.1	zinc finger (C3HC4-type RING finger) family protein.
RefSeq	XP_013644652.2	glycosyltransferase family 92 protein RCOM_0530710-like [Brassica napus]
Swiss-Prot	B9SLR1	Glycosyltransferase family 92 protein RCOM_0530710 OS=Ricinus communis OX=3988 GN=RCOM_0530710 PE=3 SV=1
TrEMBL	A0A8X7Q0B2	Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_068480 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	7	jg19879, jg22566, jg30440, jg40430, jg5454, jg7077, jg9410
Aizoaceae	Mesembryanthemum crystallinum	2	gene_3695, gene_8343
Amaranthaceae	Atriplex hortensis	2	Ah013394, Ah035866
Amaranthaceae	Beta vulgaris	1	BVRB_6g155260
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg39846, Sbi_jg42336, Sbi_jg44921, Sbi_jg55181
Amaranthaceae	Salicornia europaea	2	Seu_jg14482, Seu_jg27210
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00002337, GOSA_00014244
Amaranthaceae	Suaeda glauca	4	Sgl12378, Sgl17658, Sgl31920, Sgl37198
Amaranthaceae	Chenopodium album	5	gene:ENSEOMG00000000259, gene:ENSEOMG00000002552 ... gene:ENSEOMG00000026665, gene:ENSEOMG00000036817, gene:ENSEOMG00000049746
Amaranthaceae	Chenopodium quinoa	3	CQ.Regalona.r1.1BG0001010, CQ.Regalona.r1.6AG0006770 ... CQ.Regalona.r1.6BG0007230
Anacardiaceae	Pistacia vera	2	pistato.v30023790, pistato.v30024110
Apiaceae	Apium graveolens	4	Ag11G03523, Ag3G02569, Ag5G02172, Ag7G01969
Arecaceae	Cocos nucifera	3	COCNU_08G003460, COCNU_11G002060, scaffold007915G000030
Arecaceae	Phoenix dactylifera	4	gene-LOC103701178, gene-LOC103713611, gene-LOC103714496 ... gene-LOC103724201
Asparagaceae	Asparagus officinalis	3	AsparagusV1_03.2135.V1.1, AsparagusV1_04.577.V1.1 ... AsparagusV1_10.1738.V1.1
Asteraceae	Flaveria trinervia	4	Ftri13G00736, Ftri17G06474, Ftri18G04790, Ftri18G19374
Brassicaceae	Arabidopsis thaliana	4	AT1G27200.1, AT3G27330.1, AT4G37420.1, AT5G40720.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10003629m.g.v1.0, Thhalv10007185m.g.v1.0 ... Thhalv10027280m.g.v1.0, Thhalv10028205m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp1g21570.v2.2, Sp2g16520.v2.2, Sp7g35080.v2.2
Brassicaceae	Brassica nigra	6	BniB02g067500.2N, BniB03g019120.2N, BniB04g007320.2N ... BniB04g039560.2N, BniB05g001520.2N, BniB06g059600.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq02G1944, Ceq03G1139, Ceq07G0876
Casuarinaceae	Casuarina glauca	3	Cgl02G2017, Cgl03G1232, Cgl07G0922
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno07g12990, gene.Cymno10g08230
Dunaliellaceae	Dunaliella salina	2	Dusal.0075s00016.v1.0, Dusal.0488s00008.v1.0
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate08g17390, gene.Thate09g12410
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG03.881, evm.TU.LG05.207, evm.TU.LG06.75
Plantaginaceae	Plantago ovata	3	Pov_00023144, Pov_00024225, Pov_00027716
Plumbaginaceae	Limonium bicolor	2	Lb3G19875, Lb6G31768
Poaceae	Echinochloa crus-galli	7	AH06.3039, AH08.191, BH06.2826, BH08.162, CH08.52 ... Contig1701.3, Contig181.183
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_8AG0615900, gene-QOZ80_8BG0643190
Poaceae	Hordeum vulgare	9	HORVU.MOREX.r3.4HG0342210.1.CDS1 ... HORVU.MOREX.r3.4HG0342260.1.CDS1, HORVU.MOREX.r3.4HG0342280.1.CDS1, HORVU.MOREX.r3.4HG0343590.1.CDS1, HORVU.MOREX.r3.4HG0343650.1.CDS1, HORVU.MOREX.r3.6HG0573570.1.CDS1, HORVU.MOREX.r3.6HG0617970.1.CDS1, HORVU.MOREX.r3.7HG0703730.1, HORVU.MOREX.r3.7HG0751450.1.CDS1
Poaceae	Lolium multiflorum	13	gene-QYE76_002279, gene-QYE76_018629, gene-QYE76_018635 ... gene-QYE76_021072, gene-QYE76_021238, gene-QYE76_021978, gene-QYE76_028067, gene-QYE76_033503, gene-QYE76_037085, gene-QYE76_037319, gene-QYE76_046903, gene-QYE76_048234, gene-QYE76_067982
Poaceae	Oryza coarctata	3	Oco12G017900, Oco15G001020, Oco16G001180
Poaceae	Oryza sativa	2	LOC_Os06g51210.1, LOC_Os08g02850.1
Poaceae	Paspalum vaginatum	2	gene-BS78_07G025600, gene-BS78_10G263400
Poaceae	Puccinellia tenuiflora	13	Pt_Chr0100010, Pt_Chr0100011, Pt_Chr0202293, Pt_Chr0206395 ... Pt_Chr0206434, Pt_Chr0207194, Pt_Chr0303783, Pt_Chr0303792, Pt_Chr0402594, Pt_Chr0603583, Pt_Chr0603669, Pt_Chr0603672, Pt_Chr0702845
Poaceae	Sporobolus alterniflorus	6	Chr0G007260, Chr0G021780, Chr10G022470, Chr17G000430 ... Chr20G013000, Chr29G012340
Poaceae	Thinopyrum elongatum	6	Tel6E01G324300, Tel6E01G334500, Tel6E01G336800 ... Tel6E01G571100, Tel7E01G539800, Tel7E01G959200
Poaceae	Triticum dicoccoides	12	gene_TRIDC6AG023390, gene_TRIDC6AG023730 ... gene_TRIDC6AG023990, gene_TRIDC6AG048400, gene_TRIDC6BG029150, gene_TRIDC6BG029270, gene_TRIDC6BG031730, gene_TRIDC6BG056570, gene_TRIDC7AG043790, gene_TRIDC7AG076580, gene_TRIDC7BG035060, gene_TRIDC7BG073360
Poaceae	Triticum aestivum	21	TraesCS4A02G230900.1.cds1, TraesCS4A02G231000.1.cds1 ... TraesCS4D02G075500.1.cds1, TraesCS4D02G083000.1.cds1, TraesCS6A02G165300.1, TraesCS6A02G166400.1, TraesCS6A02G322700.1.cds1, TraesCS6B02G193800.1.cds1, TraesCS6B02G193900.1.cds1, TraesCS6B02G195000.1, TraesCS6B02G205700.1.cds1, TraesCS6B02G353400.1.cds1, TraesCS6D02G155000.1, TraesCS6D02G165900.1.cds1, TraesCS6D02G302600.1.cds1, TraesCS7A02G313700.1, TraesCS7A02G550900.1.cds1, TraesCS7B02G214400.1, TraesCS7B02G474300.1.cds1, TraesCS7D02G310300.1, TraesCS7D02G536800.1.cds1
Poaceae	Zea mays	2	Zm00001eb173440_P001, Zm00001eb271980_P001
Poaceae	Zoysia japonica	1	nbis-gene-41463
Poaceae	Zoysia macrostachya	2	Zma_g23545, Zma_g31172
Portulacaceae	Portulaca oleracea	5	evm.TU.LG03.333, evm.TU.LG12.1372, evm.TU.LG13.280 ... evm.TU.LG18.856, evm.TU.LG20.1020
Posidoniaceae	Posidonia oceanica	3	gene.Posoc05g01220, gene.Posoc06g15020, gene.Posoc06g15030
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_15_RagTag.687, evm.TU.Scaffold_3_RagTag.1982 ... evm.TU.Scaffold_6_RagTag.74, evm.TU.Scaffold_8_RagTag.1358
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-26872, nbisL1-mrna-9150
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-18191, nbisL1-mrna-19349, nbisL1-mrna-4702 ... nbisL1-mrna-6797
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-15295, nbisL1-mrna-15696, nbisL1-mrna-3133 ... nbisL1-mrna-66
Rhizophoraceae	Kandelia candel	4	add.evm.TU.utg000001l.205, add.evm.TU.utg000018l.86 ... evm.TU.utg000011l.53, evm.TU.utg000019l.29
Rhizophoraceae	Kandelia obovata	2	Maker00001634, Maker00007146
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-11999, nbisL1-mrna-20534, nbisL1-mrna-21204 ... nbisL1-mrna-21505
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-17517, nbisL1-mrna-17816, nbisL1-mrna-18732
Salicaceae	Populus euphratica	7	populus_peu01177, populus_peu07758, populus_peu15482 ... populus_peu21889, populus_peu33124, populus_peu37634, populus_peu37710
Solanaceae	Lycium barbarum	4	gene-LOC132601899, gene-LOC132622048, gene-LOC132624038 ... gene-LOC132641444
Solanaceae	Solanum chilense	4	SOLCI000009200, SOLCI005052300, SOLCI005853000 ... SOLCI007143200
Solanaceae	Solanum pennellii	4	gene-LOC107006574, gene-LOC107009523, gene-LOC107017078 ... gene-LOC107018609
Tamaricaceae	Reaumuria soongarica	2	STRG.13995_chr05_-, STRG.31448_chr11_+
Tamaricaceae	Tamarix chinensis	4	TC01G3219, TC01G3220, TC03G0537, TC03G1233
Zosteraceae	Zostera marina	2	Zosma05g08070.v3.1, Zosma05g23580.v3.1