Basic Information
Locus ID:
BniB02g066230.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
NIK2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 59757608 | 59761549 | - | BniB02g066230.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.50 | 70,387.70 Da | 38.41 | 93.14 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12087 | TM_EGFR-like | 247 | 277 | 0.00222129 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 78 | 1.9E-12 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 312 | 578 | 7.7E-44 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 130 | 189 | 2.1E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 203 | 1.17E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 289 | 581 | 1.64E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 388 | 600 | 8.0E-62 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 220 | 1.1E-55 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 280 | 387 | 5.2E-37 | - |
| SMART | SM00220 | serkin_6 | 311 | 566 | 8.7E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 311 | 566 | 35.834648 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 430 | 442 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 317 | 339 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 591 | 620 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 595 | 620 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25560.1 | NSP-interacting kinase 2. | 0 |
| RefSeq | XP_018477159.1 | PREDICTED: protein NSP-INTERACTING KINASE 2 [Raphanus sativus] | 0 |
| Q8RY65 | Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana OX=3702 GN=NIK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7Q265 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_068602 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology