Basic Information
Locus ID:
BniB02g066180.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Hsp90 protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 59723705 | 59727610 | + | BniB02g066180.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.97 | 89,667.96 Da | 42.93 | 78.72 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 87 | 284 | 2.37352E-101 | - |
| Pfam | PF00183 | Hsp90 protein | 266 | 753 | 1.3E-191 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 101 | 262 | 9.8E-12 | IPR003594 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 338 | 596 | 3.87E-89 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 618 | 739 | 8.37E-34 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 78 | 294 | 6.81E-61 | IPR036890 |
| Gene3D | G3DSA:3.30.565.10 | - | 63 | 308 | 1.8E-89 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 509 | 595 | 1.4E-32 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 336 | 508 | 4.1E-72 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 596 | 742 | 5.1E-53 | IPR037196 |
| SMART | SM00387 | HKATPase_4 | 100 | 263 | 3.0E-4 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 57 | 778 | 6.0E-240 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 98 | 107 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 149 | 166 | 2.0E-65 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 270 | 288 | 2.0E-65 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 99 | 121 | 2.0E-65 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 251 | 268 | 2.0E-65 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 167 | 184 | 2.0E-65 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 196 | 218 | 2.0E-65 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 78 | 98 | 2.0E-65 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 67 | 740 | 26.443895 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 749 | 790 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 763 | 790 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_018458385.1 | PREDICTED: heat shock protein 90-5, chloroplastic [Raphanus sativus] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7U0M2 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_068606 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology