Basic Information
Locus ID:
BniB02g065810.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
WRKY3
Description:
Transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 59577085 | 59579036 | - | BniB02g065810.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.15 | 54,061.27 Da | 54.37 | 54.27 | -0.82 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 233 | 289 | 8.1E-26 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 395 | 452 | 2.3E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 230 | 291 | 9.29E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 386 | 454 | 1.57E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 379 | 455 | 5.9E-36 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 218 | 292 | 6.8E-28 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 232 | 290 | 4.2E-36 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 394 | 453 | 2.2E-39 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 389 | 454 | 38.239315 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 227 | 291 | 23.949951 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 175 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 362 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 449 | 473 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 473 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_033128059.1 | probable WRKY transcription factor 3 isoform X1 [Brassica rapa] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7Q268 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_068657 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology