Basic Information
Locus ID:
BniB02g059670.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
NIK3
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 56098854 | 56102199 | + | BniB02g059670.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.61 | 62,550.48 Da | 44.62 | 91.62 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 32 | 91 | 6.0E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 237 | 507 | 2.1E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 221 | 514 | 8.88E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 7 | 125 | 1.19E-29 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 205 | 312 | 8.3E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 146 | 7.8E-40 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 313 | 527 | 8.2E-65 | - |
| SMART | SM00220 | serkin_6 | 236 | 509 | 1.4E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 236 | 519 | 35.622639 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 242 | 264 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 359 | 371 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.2 | - | 0 |
| RefSeq | XP_013605946.1 | PREDICTED: protein NSP-INTERACTING KINASE 3 isoform X1 [Brassica oleracea var. oleracea] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7Q228 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_069290 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology