Basic Information
Locus ID:
BniB02g059630.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 56066856 | 56069786 | + | BniB02g059630.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 59,771.43 Da | 47.31 | 77.89 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 106 | 474 | 0.0 | - |
| Pfam | PF00433 | Protein kinase C terminal domain | 429 | 473 | 6.7E-6 | IPR017892 |
| Pfam | PF00069 | Protein kinase domain | 109 | 410 | 1.7E-63 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 82 | 460 | 5.26E-88 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 309 | 428 | 1.4E-40 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 192 | 260 | 3.3E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 429 | 439 | 1.4E-40 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 105 | 191 | 3.3E-62 | - |
| SMART | SM00220 | serkin_6 | 108 | 410 | 7.8E-102 | IPR000719 |
| SMART | SM00133 | pkinase_C_6 | 411 | 475 | 3.6E-4 | IPR000961 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 411 | 483 | 13.304798 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 108 | 410 | 46.788498 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 227 | 239 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 114 | 137 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G09890.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_018458643.1 | PREDICTED: serine/threonine-protein kinase tricorner-like [Raphanus sativus] | 0 |
| Q2LZZ7 | Serine/threonine-protein kinase tricornered OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=trc PE=3 SV=1 | 0 | |
| TrEMBL | A0A8X7U2T6 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_069295 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology