HalophFGD

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Basic Information
Locus ID: BniB02g059080.2N
Species & Taxonomic ID: Brassica nigra & 3710
Genome Assembly: N100
Description: reductase 2
Maps and Mapping Data
Chromosome Start End Strand ID
B2 55678041 55705404 + BniB02g059080.2N
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.93 348,062.88 Da 40.17 93.65 -0.12
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd01713 PAPS_reductase 111 285 7.65673E-51 IPR002500
CDD cd14066 STKc_IRAK 1054 1319 3.47216E-89 -
CDD cd02993 PDI_a_APS_reductase 344 451 9.52432E-57 -
Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 112 292 1.3E-42 IPR002500
Pfam PF13855 Leucine rich repeat 900 956 1.2E-7 IPR001611
Pfam PF07714 Protein tyrosine and serine/threonine kinase 1050 1317 7.1E-46 IPR001245
Pfam PF00085 Thioredoxin 361 451 1.1E-10 IPR013766
Pfam PF02536 mTERF 1998 2147 1.5E-26 IPR003690
Pfam PF12819 Malectin-like domain 510 842 2.6E-99 IPR024788
Pfam PF02536 mTERF 2783 2989 7.1E-57 IPR003690
Pfam PF02536 mTERF 2979 3092 4.8E-40 IPR003690
Pfam PF02536 mTERF 2367 2675 1.1E-87 IPR003690
Pfam PF02536 mTERF 1427 1783 1.3E-90 IPR003690
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 1028 1317 3.28E-77 IPR011009
SUPERFAMILY SSF52833 Thioredoxin-like 342 452 2.42E-20 IPR036249
SUPERFAMILY SSF52402 Adenine nucleotide alpha hydrolases-like 85 280 1.36E-41 -
SUPERFAMILY SSF52058 L domain-like 877 981 1.19E-19 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 1124 1342 1.6E-63 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 1030 1123 7.1E-31 -
Gene3D G3DSA:3.40.50.620 HUPs 83 307 9.7E-69 IPR014729
Gene3D G3DSA:1.25.70.10 Transcription termination factor 3, mitochondrial 1932 2202 2.6E-26 IPR038538
Gene3D G3DSA:1.25.70.10 Transcription termination factor 3, mitochondrial 2865 3102 1.2E-38 IPR038538
Gene3D G3DSA:3.40.30.10 Glutaredoxin 337 453 1.7E-17 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 861 984 2.3E-22 IPR032675
Gene3D G3DSA:1.25.70.10 Transcription termination factor 3, mitochondrial 1562 1796 1.7E-36 IPR038538
Gene3D G3DSA:1.25.70.10 Transcription termination factor 3, mitochondrial 2464 2686 5.9E-38 IPR038538
SMART SM00220 serkin_6 1048 1321 1.3E-32 IPR000719
SMART SM00733 mt_12 1617 1647 2.0E-4 IPR003690
SMART SM00733 mt_12 2591 2622 7.6E-4 IPR003690
SMART SM00733 mt_12 2063 2094 440.0 IPR003690
SMART SM00733 mt_12 2134 2170 180.0 IPR003690
SMART SM00733 mt_12 3007 3038 3.9E-4 IPR003690
SMART SM00733 mt_12 2623 2657 0.033 IPR003690
SMART SM00733 mt_12 2972 3002 9.7E-4 IPR003690
SMART SM00733 mt_12 1441 1472 0.057 IPR003690
SMART SM00733 mt_12 1727 1758 5.2 IPR003690
SMART SM00733 mt_12 2381 2412 0.0024 IPR003690
SMART SM00733 mt_12 3039 3073 0.11 IPR003690
SMART SM00733 mt_12 2556 2586 1.2E-4 IPR003690
SMART SM00733 mt_12 1652 1682 14.0 IPR003690
SMART SM00733 mt_12 2099 2129 3.9E-4 IPR003690
SMART SM00733 mt_12 1687 1717 0.052 IPR003690
SMART SM00733 mt_12 2797 2828 4.8E-4 IPR003690
SMART SM00733 mt_12 2485 2516 2200.0 IPR003690
SMART SM00733 mt_12 2833 2865 410.0 IPR003690
SMART SM00733 mt_12 2937 2967 2.4 IPR003690
SMART SM00733 mt_12 2520 2551 250.0 IPR003690
SMART SM00733 mt_12 2417 2449 120.0 IPR003690
SMART SM00733 mt_12 1479 1511 320.0 IPR003690
TIGRFAM TIGR00424 APS_reduc: 5'-adenylylsulfate reductase, thioredoxin-independent 1 455 1.7E-276 IPR004508
ProSiteProfiles PS50011 Protein kinase domain profile. 1048 1321 38.067822 IPR000719
ProSiteProfiles PS51352 Thioredoxin domain profile. 326 456 12.376074 IPR013766
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 1169 1181 - IPR008271
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 1054 1076 - IPR017441
MobiDBLite mobidb-lite consensus disorder prediction 1 25 - -
Coils Coil Coil 75 95 - -
Gene Ontology
Biological Process:
GO:0000103 (sulfate assimilation) GO:0006355 (regulation of DNA-templated transcription) GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0003690 (double-stranded DNA binding) GO:0003824 (catalytic activity) GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding) GO:0016671 (oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor)
KEGG Pathway
KO Term:
K05907 (adenylyl-sulfate reductase (glutathione) [EC:1.8.4.9])
Pathway:
ko00920 (Sulfur metabolism) map00920 (Sulfur metabolism) ko01120 (Microbial metabolism in diverse environments) map01120 (Microbial metabolism in diverse environments)
Reaction:
R05717 (AMP + Sulfite + Glutathione disulfide <=> Adenylyl sulfate + 2 Glutathione)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G62180.1 5'adenylylphosphosulfate reductase 2. encodes a adenosine 5'-phosphosulfate reductase, involved in sulfate assimilation. Is a major effect locus for natural variation of shoot sulfate content in Arabidopsis. 0
RefSeq XP_024015450.1 probable LRR receptor-like serine/threonine-protein kinase PAM74 isoform X2 [Eutrema salsugineum] 0
Swiss-Prot P92981 5'-adenylylsulfate reductase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APR2 PE=1 SV=2 0
TrEMBL A0A8S1ZLM7 Genome assembly, chromosome: 2 OS=Arabidopsis arenosa OX=38785 GN=AARE701A_LOCUS4192 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Brassicaceae Arabidopsis thaliana 13 AT1G56380.2, AT1G61960.1, AT1G61970.1, AT1G61980.1 ...
AT1G61990.1, AT1G62010.1, AT1G62085.1, AT1G62110.1, AT1G62120.1, AT1G62150.1, AT1G62490.1, AT3G46950.1, AT5G23930.1
Brassicaceae Eutrema salsugineum 24 Thhalv10004187m.g.v1.0, Thhalv10019750m.g.v1.0 ...
Thhalv10022427m.g.v1.0, Thhalv10023445m.g.v1.0, Thhalv10023447m.g.v1.0, Thhalv10023457m.g.v1.0, Thhalv10023461m.g.v1.0, Thhalv10023467m.g.v1.0, Thhalv10023470m.g.v1.0, Thhalv10023472m.g.v1.0, Thhalv10023505m.g.v1.0, Thhalv10023801m.g.v1.0, Thhalv10023838m.g.v1.0, Thhalv10023868m.g.v1.0, Thhalv10023911m.g.v1.0, Thhalv10023915m.g.v1.0, Thhalv10024025m.g.v1.0, Thhalv10024039m.g.v1.0, Thhalv10024041m.g.v1.0, Thhalv10024076m.g.v1.0, Thhalv10024090m.g.v1.0, Thhalv10024124m.g.v1.0, Thhalv10024133m.g.v1.0, Thhalv10024167m.g.v1.0
Brassicaceae Schrenkiella parvula 14 Sp2g02100.v2.2, Sp2g02110.v2.2, Sp2g02550.v2.2 ...
Sp2g02560.v2.2, Sp2g02570.v2.2, Sp2g02580.v2.2, Sp2g02590.v2.2, Sp2g02600.v2.2, Sp2g02610.v2.2, Sp2g23340.v2.2, Sp3g04430.v2.2, Sp3g28660.v2.2, Sp5g14790.v2.2, Sp7g03520.v2.2
Brassicaceae Brassica nigra 12 BniB01g058040.2N, BniB02g010390.2N, BniB02g058860.2N ...
BniB02g058870.2N, BniB02g059080.2N, BniB02g059110.2N, BniB04g019510.2N, BniB04g021090.2N, BniB04g021110.2N, BniB04g021360.2N, BniB07g047770.2N, BniB08g059690.2N
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.