Basic Information
Locus ID:
BniB02g058940.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Prokaryotic RING finger family 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 55561122 | 55561754 | - | BniB02g058940.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.49 | 23,065.70 Da | 33.81 | 77.09 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 162 | 199 | 1.44055E-7 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 160 | 204 | 7.6E-12 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 161 | 206 | 9.72E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 156 | 209 | 8.4E-13 | IPR013083 |
| SMART | SM00184 | ring_2 | 162 | 199 | 9.7E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 162 | 200 | 10.718918 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 65 | 95 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62370.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_018468476.1 | PREDICTED: death-associated inhibitor of apoptosis 1 [Raphanus sativus] | 0 |
| TrEMBL | A0A8X7Q3Y1 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_069366 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology