Basic Information
Locus ID:
BniB02g057070.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 54716239 | 54718116 | - | BniB02g057070.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.24 | 49,311.91 Da | 36.56 | 80.30 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 104 | 382 | 5.55952E-93 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 103 | 377 | 1.2E-43 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 72 | 379 | 7.01E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 184 | 394 | 2.7E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 58 | 183 | 4.4E-28 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 98 | 383 | 38.152626 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 104 | 132 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 81 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03320.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018442461.1 | PREDICTED: probable receptor-like protein kinase At5g47070 [Raphanus sativus] | 0 |
| Q9LZF8 | Serine/threonine-protein kinase PCRK2 OS=Arabidopsis thaliana OX=3702 GN=PCRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7U1G5 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_069521 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology