Basic Information
Locus ID:
BniB02g056920.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 54661832 | 54664647 | - | BniB02g056920.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 100,740.92 Da | 54.00 | 76.33 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05574 | STKc_phototropin_like | 521 | 877 | 8.156E-167 | - |
| Pfam | PF00069 | Protein kinase domain | 756 | 859 | 6.0E-22 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 524 | 674 | 1.2E-34 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 511 | 875 | 6.05E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 521 | 602 | 3.8E-48 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 752 | 868 | 1.9E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 603 | 671 | 3.8E-48 | - |
| SMART | SM00220 | serkin_6 | 523 | 859 | 6.2E-90 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 523 | 859 | 43.396339 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 644 | 656 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 471 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 96 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 284 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03640.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018445507.1 | PREDICTED: serine/threonine-protein kinase D6PKL1 [Raphanus sativus] | 0 |
| Q9LFA2 | Serine/threonine-protein kinase KIPK1 OS=Arabidopsis thaliana OX=3702 GN=KIPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0KD84 | serine/threonine-protein kinase D6PKL1 OS=Raphanus sativus OX=3726 GN=LOC108817345 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G03640.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10012602m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g39110.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g056920.2N |