Basic Information
Locus ID:
BniB02g056810.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
CTR1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 54608287 | 54613370 | + | BniB02g056810.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.42 | 88,127.51 Da | 48.91 | 81.58 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 539 | 787 | 2.82136E-130 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 533 | 786 | 6.0E-72 | IPR001245 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 200 | 404 | 7.5E-78 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 526 | 787 | 2.16E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 526 | 611 | 1.0E-39 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 612 | 800 | 6.6E-64 | - |
| SMART | SM00220 | serkin_6 | 533 | 791 | 2.5E-68 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 533 | 791 | 46.604759 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 654 | 666 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 539 | 560 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 648 | 666 | 7.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 714 | 736 | 7.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 695 | 705 | 7.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 607 | 620 | 7.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 758 | 780 | 7.0E-13 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 0 |
| RefSeq | XP_013611348.1 | PREDICTED: serine/threonine-protein kinase CTR1 [Brassica oleracea var. oleracea] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D3EI35 | Protein kinase domain-containing protein OS=Brassica oleracea var. oleracea OX=109376 GN=106318052 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology