Basic Information
Locus ID:
BniB02g054350.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
UBA2
Description:
Belongs to the ubiquitin-activating E1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 53523709 | 53527728 | - | BniB02g054350.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.15 | 119,536.07 Da | 35.30 | 85.83 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01490 | Ube1_repeat2 | 492 | 1030 | 0.0 | - |
| CDD | cd01491 | Ube1_repeat1 | 74 | 459 | 1.44946E-153 | - |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 321 | 390 | 1.2E-24 | IPR032420 |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 249 | 320 | 8.9E-27 | IPR032418 |
| Pfam | PF00899 | ThiF family | 76 | 454 | 2.1E-30 | IPR000594 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 659 | 912 | 4.3E-81 | IPR019572 |
| Pfam | PF09358 | Ubiquitin fold domain | 983 | 1072 | 9.5E-24 | IPR018965 |
| Pfam | PF00899 | ThiF family | 472 | 971 | 4.7E-74 | IPR000594 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 69 | 456 | 2.22E-96 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 467 | 967 | 7.06E-128 | IPR035985 |
| Gene3D | G3DSA:3.10.290.60 | - | 985 | 1075 | 1.3E-22 | IPR038252 |
| Gene3D | G3DSA:3.50.50.80 | - | 65 | 183 | 1.9E-36 | IPR042449 |
| Gene3D | G3DSA:1.10.10.2660 | - | 644 | 919 | 7.1E-191 | IPR042063 |
| Gene3D | G3DSA:3.40.50.720 | - | 492 | 970 | 7.1E-191 | - |
| Gene3D | G3DSA:2.40.30.180 | - | 237 | 318 | 4.2E-113 | IPR042302 |
| Gene3D | G3DSA:3.40.50.12550 | - | 194 | 482 | 4.2E-113 | - |
| SMART | SM00985 | UBA_e1_C_a_2 | 950 | 1072 | 9.1E-54 | IPR018965 |
| TIGRFAM | TIGR01408 | Ube1: ubiquitin-activating enzyme E1 | 69 | 1076 | 0.0 | IPR018075 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 651 | 659 | - | IPR033127 |
| ProSitePatterns | PS00536 | Ubiquitin-activating enzyme signature 1. | 434 | 442 | - | IPR018074 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 720 | 747 | 2.6E-66 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 96 | 120 | 2.6E-66 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 519 | 542 | 2.6E-66 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 566 | 591 | 2.6E-66 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 211 | 238 | 2.6E-66 | IPR000011 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 28 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06460.1 | ubiquitin activating enzyme 2. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. | 0 |
| RefSeq | XP_013684200.2 | ubiquitin-activating enzyme E1 2 [Brassica napus] | 0 |
| P92974 | Ubiquitin-activating enzyme E1 2 OS=Arabidopsis thaliana OX=3702 GN=UBA2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7U2Q3 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_070043 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology