halophFGD

Basic Information

Locus ID: BniB02g049250.2N

Species & Taxonomic ID: Brassica nigra & 3710

Genome Assembly: N100

Description: conserved protein UCP015417, vWA (InterPro IPR011205), von Willebrand factor, type A (InterPro IPR002035)

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
B2	51159949	51161967	-	BniB02g049250.2N

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.25	75,521.19 Da	39.78	77.07	-0.47

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00198	vWFA	457	554	3.77071E-5	-
Pfam	PF11443	Domain of unknown function (DUF2828)	52	651	5.3E-221	IPR011205
SUPERFAMILY	SSF53300	vWA-like	457	561	8.06E-7	IPR036465
Gene3D	G3DSA:3.40.50.410	von Willebrand factor, type A domain	442	646	3.9E-10	IPR036465
PIRSF	PIRSF015417	T31B5_30_vWA	1	672	0.0	IPR011205
MobiDBLite	mobidb-lite	consensus disorder prediction	173	216	-	-
Coils	Coil	Coil	212	243	-	-

Best hit

Source	Best Hit ID	Description
TAIR	AT5G13210.1	Uncharacterised conserved protein UCP015417, vWA.
RefSeq	XP_013665476.2	uncharacterized protein LOC111198028 [Brassica napus]
Swiss-Prot	Q5UNY4	Uncharacterized protein L728 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_L728 PE=4 SV=1
TrEMBL	A0A816J8P5	(rape) hypothetical protein OS=Brassica napus OX=3708 GN=DARMORV10_C09P63870.1 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	4	jg27784, jg27785, jg27786, jg32805
Aizoaceae	Mesembryanthemum crystallinum	3	gene_22950, gene_3047, gene_3048
Amaranthaceae	Atriplex hortensis	5	Ah014299, Ah018315, Ah018316, Ah021148, Ah024199
Amaranthaceae	Beta vulgaris	3	BVRB_1g010460, BVRB_3g049230, BVRB_3g049240
Amaranthaceae	Salicornia bigelovii	16	Sbi_jg14782, Sbi_jg14783, Sbi_jg14784, Sbi_jg28154 ... Sbi_jg30123, Sbi_jg50831, Sbi_jg50832, Sbi_jg50834, Sbi_jg50835, Sbi_jg50836, Sbi_jg50837, Sbi_jg55559, Sbi_jg55562, Sbi_jg55563, Sbi_jg59121, Sbi_jg59122
Amaranthaceae	Salicornia europaea	7	Seu_jg23384, Seu_jg23385, Seu_jg26115, Seu_jg26116 ... Seu_jg26117, Seu_jg26118, Seu_jg7280
Amaranthaceae	Suaeda aralocaspica	4	GOSA_00012807, GOSA_00020122, GOSA_00020123, GOSA_00020124
Amaranthaceae	Suaeda glauca	16	Sgl01010, Sgl01011, Sgl02516, Sgl06116, Sgl06117, Sgl07671 ... Sgl10415, Sgl15685, Sgl35044, Sgl35704, Sgl35705, Sgl35706, Sgl40434, Sgl41021, Sgl41022, Sgl41023
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000015947, gene:ENSEOMG00000028120 ... gene:ENSEOMG00000032039, gene:ENSEOMG00000035173, gene:ENSEOMG00000047324, gene:ENSEOMG00000047779
Amaranthaceae	Chenopodium quinoa	12	CQ.Regalona.r1.1AG0013380, CQ.Regalona.r1.1BG0012720 ... CQ.Regalona.r1.3AG0007900, CQ.Regalona.r1.3AG0007910, CQ.Regalona.r1.3AG0018150, CQ.Regalona.r1.3AG0019340, CQ.Regalona.r1.3BG0007930, CQ.Regalona.r1.3BG0007940, CQ.Regalona.r1.3BG0007950, CQ.Regalona.r1.3BG0018220, CQ.Regalona.r1.3BG0019990, CQ.Regalona.r1.6BG0003200
Anacardiaceae	Pistacia vera	2	pistato.v30229150, pistato.v30235200
Apiaceae	Apium graveolens	20	Ag10G01402, Ag10G01403, Ag10G01404, Ag1G01786, Ag1G01799 ... Ag1G01800, Ag1G01804, Ag1G01805, Ag1G01806, Ag2G02407, Ag9G01708, Ag9G01709, Ag9G01727, Ag9G01728, Ag9G01729, Ag9G01731, Ag9G01732, Ag9G01733, Ag9G01826, AgUnG00506
Arecaceae	Cocos nucifera	1	COCNU_09G001210
Arecaceae	Phoenix dactylifera	1	gene-LOC103723376
Asparagaceae	Asparagus officinalis	3	AsparagusV1_07.283.V1.1, AsparagusV1_07.284.V1.1 ... AsparagusV1_07.285.V1.1
Brassicaceae	Arabidopsis thaliana	4	AT3G24780.1, AT5G13210.1, AT5G43390.1, AT5G43400.1
Brassicaceae	Eutrema salsugineum	3	Thhalv10003164m.g.v1.0, Thhalv10012951m.g.v1.0 ... Thhalv10015490m.g.v1.0
Brassicaceae	Schrenkiella parvula	1	Sp2g08280.v2.2
Brassicaceae	Brassica nigra	5	BniB02g049250.2N, BniB02g060870.2N, BniB03g065950.2N ... BniB08g051930.2N, BniB08g051950.2N
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno04g15560
Dunaliellaceae	Dunaliella salina	5	Dusal.0184s00019.v1.0, Dusal.0336s00001.v1.0 ... Dusal.1140s00003.v1.0, Dusal.1140s00005.v1.0, Dusal.1140s00006.v1.0
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate07g00190
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG03.845, evm.TU.LG03.846, evm.TU.LG03.847
Plantaginaceae	Plantago ovata	2	Pov_00000184, Pov_00021604
Plumbaginaceae	Limonium bicolor	4	Lb2G12814, Lb2G12815, Lb2G12818, Lb2G12829
Poaceae	Echinochloa crus-galli	25	AH02.3786, AH05.590, AH06.2490, AH06.2491, AH06.2494 ... AH07.2311, AH07.2312, AH07.494, AH07.580, AH08.985, BH02.3800, BH05.639, BH06.2145, BH06.2290, BH07.707, BH08.1024, BH08.1025, CH02.4674, CH05.739, CH06.2366, CH06.2508, CH06.2509, CH06.2511, CH07.587, CH08.1136
Poaceae	Eleusine coracana subsp. coracana	17	gene-QOZ80_1AG0047750, gene-QOZ80_2AG0103720 ... gene-QOZ80_6AG0515970, gene-QOZ80_6AG0545420, gene-QOZ80_6AG0546740, gene-QOZ80_6AG0546750, gene-QOZ80_6AG0546760, gene-QOZ80_6AG0546780, gene-QOZ80_6BG0467720, gene-QOZ80_6BG0498910, gene-QOZ80_6BG0500150, gene-QOZ80_6BG0500160, gene-QOZ80_6BG0500200, gene-QOZ80_8AG0625030, gene-QOZ80_8AG0625040, gene-QOZ80_8BG0653640, gene-QOZ80_8BG0653650
Poaceae	Hordeum vulgare	9	HORVU.MOREX.r3.3HG0330470.1, HORVU.MOREX.r3.5HG0496490.1 ... HORVU.MOREX.r3.5HG0496510.1.CDS1, HORVU.MOREX.r3.5HG0498740.1.CDS1, HORVU.MOREX.r3.6HG0550280.1.CDS1, HORVU.MOREX.r3.6HG0569310.1.CDS1, HORVU.MOREX.r3.6HG0569440.1.CDS1, HORVU.MOREX.r3.7HG0742180.1.CDS1, HORVU.MOREX.r3.7HG0742190.1.CDS1
Poaceae	Lolium multiflorum	23	gene-QYE76_012403, gene-QYE76_021037, gene-QYE76_021038 ... gene-QYE76_037122, gene-QYE76_037124, gene-QYE76_037125, gene-QYE76_037126, gene-QYE76_037127, gene-QYE76_037128, gene-QYE76_037130, gene-QYE76_037131, gene-QYE76_037132, gene-QYE76_053314, gene-QYE76_055087, gene-QYE76_058877, gene-QYE76_058878, gene-QYE76_059161, gene-QYE76_059162, gene-QYE76_059163, gene-QYE76_060754, gene-QYE76_065071, gene-QYE76_068822, gene-QYE76_069718
Poaceae	Oryza coarctata	9	Oco01G031290, Oco02G032450, Oco03G004040, Oco04G003990 ... Oco11G014110, Oco12G014300, Oco17G008520, Oco18G008610, Oco18G008620
Poaceae	Oryza sativa	7	LOC_Os01g27530.1, LOC_Os02g08330.1, LOC_Os05g46100.1 ... LOC_Os06g44240.1, LOC_Os09g32360.1, LOC_Os09g32370.1, LOC_Os12g04770.1
Poaceae	Paspalum vaginatum	7	gene-BS78_03G136900, gene-BS78_03G137000, gene-BS78_K073500 ... gene-BS78_03G327600, gene-BS78_04G059800, gene-BS78_10G211100, gene-BS78_K073600
Poaceae	Puccinellia tenuiflora	6	Pt_Chr0202324, Pt_Chr0207471, Pt_Chr0401472, Pt_Chr0401473 ... Pt_Chr0401476, Pt_Chr0500375
Poaceae	Sporobolus alterniflorus	12	Chr02G031110, Chr02G031120, Chr05G008810, Chr05G008820 ... Chr05G034080, Chr0G000310, Chr0G000320, Chr11G018470, Chr12G011360, Chr26G009710, Chr29G008340, Chr29G008350
Poaceae	Thinopyrum elongatum	17	Tel1E01G542500, Tel2E01G462600, Tel3E01G398700 ... Tel5E01G176300, Tel5E01G485700, Tel5E01G486300, Tel5E01G508400, Tel6E01G171200, Tel6E01G308300, Tel6E01G308500, Tel6E01G308600, Tel7E01G683800, Tel7E01G683900, Tel7E01G862600, Tel7E01G862700, Tel7E01G863200, Tel7E01G872100
Poaceae	Triticum dicoccoides	21	gene_TRIDC1AG052150, gene_TRIDC1BG059420 ... gene_TRIDC3BG087340, gene_TRIDC4AG013860, gene_TRIDC5AG045220, gene_TRIDC5AG045230, gene_TRIDC5BG049040, gene_TRIDC5BG051070, gene_TRIDC6AG008980, gene_TRIDC6AG020530, gene_TRIDC6BG026450, gene_TRIDC6BG026480, gene_TRIDC7AG007070, gene_TRIDC7AG055830, gene_TRIDC7AG070430, gene_TRIDC7AG071240, gene_TRIDC7BG030580, gene_TRIDC7BG048150, gene_TRIDC7BG065030, gene_TRIDC7BG065040, gene_TRIDC7BG065870
Poaceae	Triticum aestivum	35	TraesCS1A02G354300.1.cds1, TraesCS1B02G367400.1.cds1 ... TraesCS1D02G356100.1.cds1, TraesCS3B02G607400.1.cds1, TraesCS3D02G541900.1.cds1, TraesCS5A02G302500.1.cds1, TraesCS5A02G302600.1.cds1, TraesCS5A02G319700.1, TraesCS5B02G302800.1.cds1, TraesCS5B02G302900.1.cds1, TraesCS5B02G319900.1, TraesCS5B02G320000.1.cds1, TraesCS5D02G309200.1.cds1, TraesCS5D02G309300.1.cds1, TraesCS5D02G325700.1, TraesCS6A02G073400.1.cds1, TraesCS6A02G148700.1.cds1, TraesCS6A02G149200.1.cds1, TraesCS6B02G098400.1.cds1, TraesCS6B02G176900.1.cds1, TraesCS6B02G177100.1.cds1, TraesCS6D02G071700.1.cds1, TraesCS6D02G138100.1.cds1, TraesCS6D02G138500.1.cds1, TraesCS7A02G503000.1, TraesCS7B02G301000.1.cds1, TraesCS7B02G410400.1.cds1, TraesCS7B02G410500.1.cds1, TraesCS7B02G410900.1, TraesCS7B02G417500.1.cds1, TraesCS7D02G394600.1.cds1, TraesCS7D02G490400.1.cds1, TraesCS7D02G490500.1.cds1, TraesCS7D02G490900.1, TraesCS7D02G496700.1.cds1
Poaceae	Zea mays	7	Zm00001eb206670_P001, Zm00001eb217520_P001 ... Zm00001eb217530_P001, Zm00001eb220150_P001, Zm00001eb220160_P001, Zm00001eb220170_P001, Zm00001eb385690_P001
Poaceae	Zoysia japonica	4	nbis-gene-44180, nbis-gene-9878, nbis-gene-9879 ... nbis-gene-9880
Poaceae	Zoysia macrostachya	1	Zma_g15062
Portulacaceae	Portulaca oleracea	4	evm.TU.LG09.1322, evm.TU.LG11.1278, evm.TU.LG11.1433 ... evm.TU.LG21.301
Posidoniaceae	Posidonia oceanica	2	gene.Posoc01g34730, gene.Posoc05g06670
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_15_RagTag.916, evm.TU.Scaffold_17_RagTag.140 ... evm.TU.Scaffold_3_RagTag.1268
Rhizophoraceae	Carallia pectinifolia	5	nbisL1-mrna-15830, nbisL1-mrna-1591, nbisL1-mrna-27102 ... nbisL1-mrna-27287, nbisL1-mrna-4803
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-11399, nbisL1-mrna-18926, nbisL1-mrna-6003
Rhizophoraceae	Ceriops zippeliana	5	nbisL1-mrna-14656, nbisL1-mrna-15499, nbisL1-mrna-15500 ... nbisL1-mrna-2525, nbisL1-mrna-2526
Rhizophoraceae	Kandelia candel	5	add.evm.TU.utg000001l.258, add.evm.TU.utg000001l.259 ... add.evm.TU.utg000011l.211, add.evm.TU.utg000013l.25, add.evm.TU.utg000019l.199
Rhizophoraceae	Kandelia obovata	3	Maker00001726, Maker00002458, Maker00002499
Rhizophoraceae	Rhizophora apiculata	9	nbisL1-mrna-19269, nbisL1-mrna-19526, nbisL1-mrna-21163 ... nbisL1-mrna-21715, nbisL1-mrna-21716, nbisL1-mrna-21722, nbisL1-mrna-21723, nbisL1-mrna-21730, nbisL1-mrna-21731
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-15970, nbisL1-mrna-17160, nbisL1-mrna-17620 ... nbisL1-mrna-1963
Salicaceae	Populus euphratica	3	populus_peu34763, populus_peu36243, populus_peu36244
Solanaceae	Lycium barbarum	4	gene-LOC132608931, gene-LOC132610047, gene-LOC132615896 ... gene-LOC132626243
Solanaceae	Solanum chilense	1	SOLCI001747800
Solanaceae	Solanum pennellii	1	gene-LOC107029350
Tamaricaceae	Reaumuria soongarica	2	STRG.30154_chr10_-, gene_11960
Tamaricaceae	Tamarix chinensis	1	TC04G0569