Basic Information
Locus ID:
BniB02g048150.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
DRM2
Description:
Domains rearranged methyltransferase 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 50679955 | 50682952 | + | BniB02g048150.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 68,006.75 Da | 50.84 | 80.92 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 484 | 598 | 1.1E-9 | IPR001525 |
| SUPERFAMILY | SSF46934 | UBA-like | 71 | 124 | 4.82E-5 | IPR009060 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 483 | 599 | 1.93E-16 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 283 | 475 | 4.87E-19 | IPR029063 |
| SUPERFAMILY | SSF46934 | UBA-like | 166 | 208 | 4.62E-5 | IPR009060 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 278 | 365 | 1.1E-5 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 71 | 126 | 1.5E-7 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 479 | 609 | 2.2E-28 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 179 | 209 | 1.1E-5 | - |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 83 | 124 | 10.354057 | IPR015940 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 175 | 219 | 8.908232 | IPR015940 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 278 | 607 | 131.386719 | IPR030380 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 228 | 256 | - | - |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 0 |
| RefSeq | XP_018446070.1 | PREDICTED: DNA (cytosine-5)-methyltransferase DRM2-like [Raphanus sativus] | 0 |
| Q9M548 | DNA (cytosine-5)-methyltransferase DRM2 OS=Arabidopsis thaliana OX=3702 GN=DRM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0KEY6 | DNA (Cytosine-5)-methyltransferase DRM2-like OS=Raphanus sativus OX=3726 GN=LOC108817778 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology