Basic Information
Locus ID:
BniB02g045970.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 49702027 | 49702308 | + | BniB02g045970.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.80 | 10,563.28 Da | 53.85 | 103.76 | 0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13445 | RING-type zinc-finger | 30 | 58 | 2.9E-7 | IPR027370 |
| SUPERFAMILY | SSF57850 | RING/U-box | 22 | 65 | 2.8E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 15 | 71 | 2.7E-10 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 30 | 65 | 8.815781 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 49 | 58 | - | IPR017907 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G74370.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_048617384.1 | uncharacterized protein LOC125589132 [Brassica napus] | 0 |
| TrEMBL | A0A8X7TUL3 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_084475 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology