Basic Information
Locus ID:
BniB02g040880.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
SRSF protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 46906295 | 46908301 | + | BniB02g040880.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 60,896.01 Da | 37.42 | 69.81 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 34 | 471 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 45 | 185 | 8.9E-20 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 303 | 471 | 3.6E-22 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 40 | 484 | 8.84E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 128 | 472 | 2.5E-81 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 21 | 127 | 6.0E-40 | - |
| SMART | SM00220 | serkin_6 | 45 | 471 | 2.3E-57 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 45 | 471 | 30.60507 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 172 | 184 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 51 | 74 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 473 | 538 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 511 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22840.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013611642.1 | PREDICTED: SRSF protein kinase 2-like [Brassica oleracea var. oleracea] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7V4Y8 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_036403 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology