Basic Information
Locus ID:
BniB02g039820.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 46260598 | 46261215 | - | BniB02g039820.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.65 | 15,756.26 Da | 28.67 | 100.86 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 2 | 104 | 2.1E-17 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 98 | 2.99E-25 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 114 | 1.2E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 140 | 16.04705 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60080.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009121323.1 | probable serine/threonine-protein kinase PBL5 [Brassica rapa] | 0 |
| Q9SXB4 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 OS=Arabidopsis thaliana OX=3702 GN=At1g11300 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3P6CHU1 | Protein kinase domain-containing protein OS=Brassica campestris OX=3711 GN=BRAA10T43807Z PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 2 | AT5G60080.1, AT5G60090.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10009373m.g.v1.0, Thhalv10013099m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp6g21740.v2.2, Sp6g21750.v2.2 |
| Brassicaceae | Brassica nigra | 5 | BniB02g039790.2N, BniB02g039820.2N, BniB05g040380.2N ... |