Basic Information
Locus ID:
BniB02g038380.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 45483123 | 45484848 | - | BniB02g038380.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.14 | 57,571.12 Da | 43.26 | 78.02 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 205 | 454 | 1.1587E-119 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 203 | 454 | 7.5E-62 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 189 | 454 | 1.35E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 186 | 281 | 6.1E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 282 | 486 | 3.7E-62 | - |
| SMART | SM00220 | serkin_6 | 198 | 457 | 2.1E-57 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 198 | 458 | 42.096012 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 322 | 334 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 278 | 291 | 4.9E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 381 | 403 | 4.9E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 316 | 334 | 4.9E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 425 | 447 | 4.9E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 362 | 372 | 4.9E-19 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 137 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 139 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 58 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58950.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009120403.1 | serine/threonine/tyrosine-protein kinase HT1 [Brassica rapa] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7V3K5 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_036308 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology