Basic Information
Locus ID:
BniB02g038370.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 45479570 | 45481429 | + | BniB02g038370.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.67 | 52,686.48 Da | 33.61 | 81.80 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 147 | 421 | 9.1E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 120 | 423 | 1.62E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 112 | 223 | 2.5E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 224 | 442 | 7.4E-53 | - |
| SMART | SM00220 | serkin_6 | 146 | 403 | 2.1E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 146 | 422 | 39.028934 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 268 | 280 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 152 | 178 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58940.1 | calmodulin-binding receptor-like cytoplasmic kinase 1. Arabidopsis thaliana calmodulin-binding receptor-like kinase mRNA | 0 |
| RefSeq | XP_013612011.1 | PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 1 [Brassica oleracea var. oleracea] | 0 |
| Q9FIL7 | Calmodulin-binding receptor-like cytoplasmic kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRCK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3P6CHA0 | (field mustard) hypothetical protein (Fragment) OS=Brassica campestris OX=3711 GN=BRAA10T43699Z PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology